Pairwise Alignments

Query, 533 a.a., CheW protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 173 a.a., Positive regulator of CheA protein activity (CheW) from Variovorax sp. SCN45

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 52/146 (35%), Positives = 90/146 (61%), Gaps = 6/146 (4%)

Query: 385 QFVAFRLMNEEYGVPIDSVQEIVRVPEELTRVPKTPDFIEGVVNLRGVVLPVVDQRRRFG 444
           + V F+L  EEYG+ I  VQE+ R  + +TR+   P++I+GVVNLRG+++P++D R +F 
Sbjct: 26  EVVTFKLGEEEYGIDIQKVQEL-RGYDAVTRIANAPEYIKGVVNLRGIIVPIIDMRIKFK 84

Query: 445 LPGMERNDRQRIMVYTIRGVRTGFIVDSVSEVIRIPASLIGPAPVLSD--EQQRLIRRVA 502
           L     +    ++V  I G   G +VDSVS+VI + A  I PAP +    +   LI  + 
Sbjct: 85  LGDPTYDQFTVVIVLNIGGRVVGMVVDSVSDVITLSAEQIKPAPEMGSVLDADYLI-GLG 143

Query: 503 NIEKQKRMILLLDVEQLLDGKELAVV 528
            ++   RM++L+D+++L+  +E+ ++
Sbjct: 144 TLD--DRMLILVDIDRLMSSQEMGLI 167



 Score = 82.8 bits (203), Expect = 9e-21
 Identities = 48/164 (29%), Positives = 93/164 (56%), Gaps = 4/164 (2%)

Query: 9   LDSGPDPSQVTGGAAAGALQAGNARQFVIFHVDNDLFAVPLSEVQEIIRMPDVVCVPLSP 68
           L    DP Q    A + +   G+  + V F +  + + + + +VQE+     V  +  +P
Sbjct: 2   LTKAKDPLQQAASAPSPST-GGSRLEVVTFKLGEEEYGIDIQKVQELRGYDAVTRIANAP 60

Query: 69  AALEGLANLRGSVLPVIRLRHVFGMAPVVHDDATRVVVLD-QGRPVGLVVDRVANVVSVE 127
             ++G+ NLRG ++P+I +R  F +    +D  T V+VL+  GR VG+VVD V++V+++ 
Sbjct: 61  EYIKGVVNLRGIIVPIIDMRIKFKLGDPTYDQFTVVIVLNIGGRVVGMVVDSVSDVITLS 120

Query: 128 ADHIEPSGAIGGTVDTDLLTGMIKGDGDRAMVMILDAAKVVARE 171
           A+ I+P+  +G  +D D L G+  G  D  M++++D  ++++ +
Sbjct: 121 AEQIKPAPEMGSVLDADYLIGL--GTLDDRMLILVDIDRLMSSQ 162



 Score = 66.2 bits (160), Expect = 8e-16
 Identities = 46/179 (25%), Positives = 95/179 (53%), Gaps = 17/179 (9%)

Query: 189 RAEDGRVQAAT-----DGDDESQLVSFEVAGQEYALPIERVQEIVQIPGLITDVPNTPAH 243
           +A+D   QAA+      G    ++V+F++  +EY + I++VQE+      +T + N P +
Sbjct: 4   KAKDPLQQAASAPSPSTGGSRLEVVTFKLGEEEYGIDIQKVQELRGYDA-VTRIANAPEY 62

Query: 244 VLGVMTLRNRLLPLVGLREMFGLPTLALTETNKIVVVSLEGGAGGSGRSVGVVMDSVKEV 303
           + GV+ LR  ++P++ +R  F L      +   ++V+++       GR VG+V+DSV +V
Sbjct: 63  IKGVVNLRGIIVPIIDMRIKFKLGDPTYDQFTVVIVLNI------GGRVVGMVVDSVSDV 116

Query: 304 LRVGHALIDPMPALLARTGNLGEIEAICRLQG-GNRLVSILSADAMFNSDEIRAVAANA 361
           + +    I P P +    G++ + + +  L    +R++ ++  D + +S E+  + A A
Sbjct: 117 ITLSAEQIKPAPEM----GSVLDADYLIGLGTLDDRMLILVDIDRLMSSQEMGLIEAAA 171