Pairwise Alignments

Query, 533 a.a., CheW protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 171 a.a., Positive regulator of CheA protein activity (CheW) from Variovorax sp. SCN45

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 52/146 (35%), Positives = 89/146 (60%), Gaps = 6/146 (4%)

Query: 385 QFVAFRLMNEEYGVPIDSVQEIVRVPEELTRVPKTPDFIEGVVNLRGVVLPVVDQRRRFG 444
           + V F+L  EEYG+ I  VQE+ R  + +TR+   P++I+GVVNLRG+++P++D R +F 
Sbjct: 25  EVVTFKLGEEEYGIDIQKVQEL-RGYDAVTRIANAPEYIKGVVNLRGIIVPIIDMRIKFK 83

Query: 445 LPGMERNDRQRIMVYTIRGVRTGFIVDSVSEVIRIPASLIGPAPVLSD--EQQRLIRRVA 502
           L     +    ++V  I G   G +VDSVS+VI + A  I PAP +    +   LI  + 
Sbjct: 84  LGDPTYDQFTVVIVLNIGGRVVGMVVDSVSDVITLSAEQIKPAPEMGSVLDADYLI-GLG 142

Query: 503 NIEKQKRMILLLDVEQLLDGKELAVV 528
            ++   RM++L+D+++L+   E+ ++
Sbjct: 143 TLD--DRMLILVDIDRLMSSDEMGLI 166



 Score = 81.6 bits (200), Expect = 2e-20
 Identities = 49/166 (29%), Positives = 94/166 (56%), Gaps = 7/166 (4%)

Query: 7   AALDSGPDPSQVTGGAAAGALQAGNARQFVIFHVDNDLFAVPLSEVQEIIRMPDVVCVPL 66
           A + S     Q   GA+ GA +     + V F +  + + + + +VQE+     V  +  
Sbjct: 2   AEIASFQQRQQQQSGASTGASRL----EVVTFKLGEEEYGIDIQKVQELRGYDAVTRIAN 57

Query: 67  SPAALEGLANLRGSVLPVIRLRHVFGMAPVVHDDATRVVVLD-QGRPVGLVVDRVANVVS 125
           +P  ++G+ NLRG ++P+I +R  F +    +D  T V+VL+  GR VG+VVD V++V++
Sbjct: 58  APEYIKGVVNLRGIIVPIIDMRIKFKLGDPTYDQFTVVIVLNIGGRVVGMVVDSVSDVIT 117

Query: 126 VEADHIEPSGAIGGTVDTDLLTGMIKGDGDRAMVMILDAAKVVARE 171
           + A+ I+P+  +G  +D D L G+  G  D  M++++D  ++++ +
Sbjct: 118 LSAEQIKPAPEMGSVLDADYLIGL--GTLDDRMLILVDIDRLMSSD 161



 Score = 66.2 bits (160), Expect = 8e-16
 Identities = 41/158 (25%), Positives = 87/158 (55%), Gaps = 12/158 (7%)

Query: 198 ATDGDDESQLVSFEVAGQEYALPIERVQEIVQIPGLITDVPNTPAHVLGVMTLRNRLLPL 257
           A+ G    ++V+F++  +EY + I++VQE+      +T + N P ++ GV+ LR  ++P+
Sbjct: 17  ASTGASRLEVVTFKLGEEEYGIDIQKVQELRGYDA-VTRIANAPEYIKGVVNLRGIIVPI 75

Query: 258 VGLREMFGLPTLALTETNKIVVVSLEGGAGGSGRSVGVVMDSVKEVLRVGHALIDPMPAL 317
           + +R  F L      +   ++V+++       GR VG+V+DSV +V+ +    I P P +
Sbjct: 76  IDMRIKFKLGDPTYDQFTVVIVLNI------GGRVVGMVVDSVSDVITLSAEQIKPAPEM 129

Query: 318 LARTGNLGEIEAICRLQG-GNRLVSILSADAMFNSDEI 354
               G++ + + +  L    +R++ ++  D + +SDE+
Sbjct: 130 ----GSVLDADYLIGLGTLDDRMLILVDIDRLMSSDEM 163