Pairwise Alignments

Query, 533 a.a., CheW protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 167 a.a., Chemotaxis protein CheW from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 58/158 (36%), Positives = 96/158 (60%), Gaps = 10/158 (6%)

Query: 377 LGTTDDEEQFVAFRLMNEEYGVPIDSVQEIVRVPEELTRVPKTPDFIEGVVNLRGVVLPV 436
           L +    ++F+ F L +EEYG+ I  VQEI R  +++TR+  TP FI+GV NLRGV++P+
Sbjct: 10  LASEPSGQEFLVFTLGDEEYGIDILKVQEI-RGYDQVTRIANTPAFIKGVTNLRGVIVPI 68

Query: 437 VDQRRRFGLPGMERNDRQRIMVYTIRGVRTGFIVDSVSEVIRIPASLIGPAP----VLSD 492
           VD R +F    ++ ND   ++V  +     G +VD VS+V+ + A  I PAP     LS 
Sbjct: 69  VDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAPEFAVTLST 128

Query: 493 EQQRLIRRVANIEKQKRMILLLDVEQLLDGKELAVVGS 530
           E    +  + +     RM++L+++E+LL+ +E+A++ S
Sbjct: 129 EYLTGLGALGD-----RMLILVNIEKLLNSEEMALLDS 161



 Score = 84.7 bits (208), Expect = 2e-21
 Identities = 48/149 (32%), Positives = 90/149 (60%), Gaps = 2/149 (1%)

Query: 31  NARQFVIFHVDNDLFAVPLSEVQEIIRMPDVVCVPLSPAALEGLANLRGSVLPVIRLRHV 90
           + ++F++F + ++ + + + +VQEI     V  +  +PA ++G+ NLRG ++P++ LR  
Sbjct: 15  SGQEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTNLRGVIVPIVDLRIK 74

Query: 91  FGMAPVVHDDATRVVVLDQG-RPVGLVVDRVANVVSVEADHIEPSGAIGGTVDTDLLTGM 149
           F    V ++D T V+VL+ G R VG+VVD V++V+S+ A+ I P+     T+ T+ LTG 
Sbjct: 75  FSQVDVDYNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAPEFAVTLSTEYLTG- 133

Query: 150 IKGDGDRAMVMILDAAKVVAREFQAIGSA 178
           +   GDR ++++     + + E   + SA
Sbjct: 134 LGALGDRMLILVNIEKLLNSEEMALLDSA 162



 Score = 61.6 bits (148), Expect = 2e-14
 Identities = 44/151 (29%), Positives = 79/151 (52%), Gaps = 14/151 (9%)

Query: 206 QLVSFEVAGQEYALPIERVQEIVQIPGLITDVPNTPAHVLGVMTLRNRLLPLVGLREMFG 265
           + + F +  +EY + I +VQEI      +T + NTPA + GV  LR  ++P+V LR  F 
Sbjct: 18  EFLVFTLGDEEYGIDILKVQEIRGYDQ-VTRIANTPAFIKGVTNLRGVIVPIVDLRIKFS 76

Query: 266 LPTLALTETNKIVVVSLEGGAGGSGRSVGVVMDSVKEVLRVGHALIDPMP--ALLARTGN 323
              +   +   ++V++L        R VG+V+D V +VL +    I P P  A+   T  
Sbjct: 77  QVDVDYNDNTVVIVLNL------GQRVVGIVVDGVSDVLSLTAEQIRPAPEFAVTLSTEY 130

Query: 324 LGEIEAICRLQGGNRLVSILSADAMFNSDEI 354
           L  + A+     G+R++ +++ + + NS+E+
Sbjct: 131 LTGLGAL-----GDRMLILVNIEKLLNSEEM 156