Pairwise Alignments

Query, 349 a.a., Periplasmic binding protein/LacI transcriptional regulator (NCBI) from Rhodospirillum rubrum S1H

Subject, 313 a.a., ABC transporter, substrate binding protein (ribose) from Agrobacterium fabrum C58

 Score = 68.6 bits (166), Expect = 2e-16
 Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 7/220 (3%)

Query: 46  IATVVKVDGIAWFDRMREGAKQ-FGADTGHDTWMVGPSQADAAA-QVQLVENLIAQGVDA 103
           IA +VK     ++  +++GA       +G+     GP+   A A QV +VEN I + V  
Sbjct: 26  IAVIVKTVNSTFWQNVQKGADAAMKNSSGNTMTFQGPAAESAIADQVNMVENAINRKVAG 85

Query: 104 ICVVPFSVEALEPVLKKARDRGIVVIAHEASNITNADFVLEAF---DNLAYGAKLMEVLG 160
           I + P   +AL P +KKA +  I V+  ++     ++   ++F   DN   G    + L 
Sbjct: 86  IVLAPSDPDALVPAVKKAWEARIPVVLIDSQLAKGSEQYYQSFLATDNKKAGELAAQALI 145

Query: 161 TYMKGEGKYVTTVGSLTSKSQNEWIDGAIAYQKAHFPKMEQATGRLETYDDANTDYNKLK 220
             +  EGK         + S+   + G   Y + H     Q  G   +     T  N+  
Sbjct: 146 DKVGTEGKIAVMSYVAGAGSEIGRVGGFTDYIQMH--SKLQIVGPFYSQSQMATALNQTT 203

Query: 221 EVLTTYPDIKGILGGPMPTSAGAGRLISERGLKDKLFFAG 260
           +VL    D+KGI G   PT+ G GR +++ G   K+   G
Sbjct: 204 DVLAANSDLKGIFGANEPTAIGVGRALAQSGKAGKVIAMG 243