Pairwise Alignments

Query, 314 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 336 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  232 bits (591), Expect = 1e-65
 Identities = 130/335 (38%), Positives = 190/335 (56%), Gaps = 30/335 (8%)

Query: 1   MVSFVLKRLALLVPMLLGASLVIFLMLRLGPSDPAMDYLRLSRIPPTVQALAETRQRLGL 60
           M+SF+ +RL LL+P   G +L+ F ++RL P DP    +   R+ P + A A   +RLGL
Sbjct: 1   MLSFIARRLGLLIPTFFGITLLTFALIRLIPGDPVEVMMGERRVDPEMHAQA--MERLGL 58

Query: 61  DQPLAVQYWVWLNKALHLDFGVSYATGRPVLPDLLHYLPATLHLAGVALALTLGLSIPLG 120
           ++PL VQY  ++ K    D G S  T   V  + L   PATL LA  AL     + +  G
Sbjct: 59  NKPLPVQYLDYVGKLAQGDLGESLRTRESVWREFLTLFPATLELAFAALLFAGVVGLLAG 118

Query: 121 MWAARRRDALPDQIVRGVAFLGVSMPNFWLGFLLVLVFSVELGWLPAMGR---------- 170
           + AA +R +L D  V G++  G SMP FW G +L++ FSV LGW P  GR          
Sbjct: 119 VIAALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYDIEPK 178

Query: 171 ------------------GGAEHMIMPAVAIAFMSLSINARLLRASMLEVSGQRHVYYAR 212
                                 H+I+PA+ +  + L++ AR+ R+SMLEV  + ++  AR
Sbjct: 179 TGFMLIDTLLSDEEGAFKDAVMHLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTAR 238

Query: 213 LRGLSAAKVERAHILRNALLPIITATGMHVGELIGGTLVIESIFGWPGVGRFAVSAIFNR 272
            +GLS A+V   H LRNAL+P++T  G+ VG L+ G ++ E+IF WPG+G++ + AI  R
Sbjct: 239 AKGLSPARVVFVHGLRNALIPVLTVFGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGAR 298

Query: 273 DYPVIQCFTLLMVLIFVLCNLIVDIVYAWADPRIR 307
           DYPV+Q   LL+  + +L N +VDI+Y  A+PRIR
Sbjct: 299 DYPVVQNGILLIACLVILVNFVVDILYGLANPRIR 333