Pairwise Alignments

Query, 277 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 539 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

 Score =  181 bits (460), Expect = 2e-50
 Identities = 113/254 (44%), Positives = 152/254 (59%), Gaps = 12/254 (4%)

Query: 3   PLLTARAASKSYRTVSLVGRSPAKTVLSEATVTLSEGETVALLGRSGSGKSTLARLLLGL 62
           P+L  R A KSY              L   +  L  GETVA++G SGSGKSTLAR+LL L
Sbjct: 274 PILKVRNARKSYGGFE---------ALKGISFDLKAGETVAVVGESGSGKSTLARILLRL 324

Query: 63  EKPDHGTIAFRGRPLGGFSRAEWRAFRGAVQMVFQDSLGAVNPRHRVGRIIGEP-LRHLT 121
           + PD GT  ++G+ L   S +E    R  +QMVFQD   ++NPR  V ++I E  + H  
Sbjct: 325 DDPDSGTAHWKGQDLFTLSPSELFKLRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPE 384

Query: 122 TLDDAGRAARRDALLRQVGLTPEDADKLPQQMSGGQLQRVCIARALAPGPRLLVLDEAVS 181
            L  A   AR   LL +VGL+PE   + P Q SGGQ QR+ IARALA  P+L+V DEAVS
Sbjct: 385 ILPKAKWRARAAELLERVGLSPEHMGRYPHQFSGGQRQRIAIARALALEPQLIVCDEAVS 444

Query: 182 NLDLMLQIQMIDLLKDLQRQTGMAYLFVTHDLRLVERFCQRVIVLDEGKIVEEAPVTGAQ 241
            LD+ +Q Q++ LL  L+R+ G+A++F+ HDL LV  F   V+V+ +G++VE   V  AQ
Sbjct: 445 ALDVSVQAQVVRLLDKLRREMGIAFIFIAHDLPLVRDFADYVMVMQKGEVVEFGTV--AQ 502

Query: 242 RFEHPASRALQRAI 255
            F++P  R  Q  I
Sbjct: 503 VFDNPQQRYTQALI 516



 Score =  135 bits (340), Expect = 2e-36
 Identities = 93/227 (40%), Positives = 130/227 (57%), Gaps = 14/227 (6%)

Query: 36  LSEGETVALLGRSGSGKSTLARLLLGL-----EKPDHGTIAFRGRPLGGFSRAEWRAFRG 90
           +  GET+A+LG SGSGKS  +  ++ L      K   G I   G+ L   S  + RA  G
Sbjct: 32  VDRGETLAILGESGSGKSVSSSAIMNLIDMPPGKISSGEILLNGKDLLKMSADDRRAVNG 91

Query: 91  A-VQMVFQDSLGAVNPRHRVGRIIGEPLRHLTTLDDAGRAARRDAL--LRQVGLT-PEDA 146
             + M+FQD L  +NP + VG  + E LR   T     R A+ +AL   ++V L  PE A
Sbjct: 92  RLIAMIFQDPLSHLNPVYTVGWQMREALR---THGIDNRQAQVEALRLFKRVALPEPEKA 148

Query: 147 -DKLPQQMSGGQLQRVCIARALAPGPRLLVLDEAVSNLDLMLQIQMIDLLKDLQRQTGMA 205
            DK P + SGGQ QRV IA ALA  P LL+ DE  + LD+ +Q +++ LLK+LQR+TGM 
Sbjct: 149 VDKYPHEFSGGQRQRVMIAMALALKPNLLIADEPTTALDVTVQAEVLALLKELQRETGMG 208

Query: 206 YLFVTHDLRLVERFCQRVIVLDEGKIVEEAPVTGAQRF-EHPASRAL 251
            L +THDL +V     RV+V+++G +VE   V    R  +HP ++ L
Sbjct: 209 VLIITHDLGVVSEVADRVVVMEKGVLVESGTVREVYRNPQHPYTKKL 255