Pairwise Alignments

Query, 639 a.a., Excinuclease ABC, C subunit (NCBI) from Rhodospirillum rubrum S1H

Subject, 607 a.a., UvrABC system protein C from Pseudomonas putida KT2440

 Score =  458 bits (1179), Expect = e-133
 Identities = 263/609 (43%), Positives = 362/609 (59%), Gaps = 15/609 (2%)

Query: 35  AALRTMPSSPGVYRMIDGKGDVLYVGKARNLKRRVINYTQPHRLPVRIQRMIAATLTMEV 94
           A L T    PGVYRM DG+  +LYVGKA+NLK+R+ +Y +   L  +   ++A    +E 
Sbjct: 9   AFLATCSGRPGVYRMFDGEARLLYVGKAKNLKKRLASYFRKTGLAPKTAALVARIAQVET 68

Query: 95  LTTHTEAEALLLESNLIKKLKPRYNILLRDDKSFPYIEITSDHAFPRIVKFRGTLRKGGE 154
             T  E EALLLE NLIK+ +P YNILLRDDKS+PY+ + SD  FPR+   RG  +  G 
Sbjct: 69  TITANETEALLLEQNLIKEWRPPYNILLRDDKSYPYVFL-SDGEFPRLGIHRGAKKAKGR 127

Query: 155 YFGPFASAGAVTSTLTALQKTFLLRTCADNVFASRSRPCLLFQIKRCAAPCVDRVAEADY 214
           YFGP+ SAGA+  +L+ LQK F +R C D+ +A+R+RPCL +QIKRC  PC D V   +Y
Sbjct: 128 YFGPYPSAGAIRESLSLLQKAFSVRQCEDSYYANRTRPCLQYQIKRCKGPCTDLVTAEEY 187

Query: 215 KALVEEARAFLSGSSKALQHDLAKRMDEAAQALDYEQAAIFRDRIKALTNVQSHQDINLP 274
              V  +  FL G S+ L ++L   M++AA ALD+E+AA  RD+I  L  VQ  Q I   
Sbjct: 188 AEDVRHSVMFLEGRSQQLGNELNAEMEKAAMALDFEKAAELRDQIALLRRVQDQQYIEGG 247

Query: 275 TLGEADVIACHQAGGQTCVQVFFFRGGRNNGNRSFFPAHAGDEGLPEVLEAFLGQFYAGF 334
           + G+ DVIA     G  CV +   RGGR  G+++FFP    +E + EV+ AFL Q+Y G 
Sbjct: 248 S-GDVDVIAAFVNPGGACVHLISVRGGRVLGSKNFFPQVGIEEEVAEVMAAFLSQYYLG- 305

Query: 335 PPPREI--LLLTDIPHHDL--VEQALCLRAGHRVRLVVPRRGSRRKLIDHALANAREALG 390
              RE+   L+ ++ H D   + +AL    G  + +    RG+R +    A+ NA +AL 
Sbjct: 306 NAERELPGELIVNVVHEDFNAITEALHTLRGRELTISHRVRGTRARWQQLAVTNAEQALN 365

Query: 391 RRLAESSAQRTLLEGTAVAFGLDGPLQRVEIYDNSHISGTHAVGGMVVAGPEGFMKAAYR 450
            RLA         E  A   GLD   QR+E YD SH SG   V   VV GPEG +K+ YR
Sbjct: 366 ARLANRQHMAARFEALAEVLGLDEVPQRLECYDISHSSGEATVASCVVFGPEGPIKSDYR 425

Query: 451 KFNIRSPDITPGDDYAMMREVMIRRFARARKEDPDRDRGQWPDLVLIDGGLGQLNAVREA 510
           +FNI   D+T GDDYA M + + RR+ R +  +     G+ PD++L+DGG GQLN  R+ 
Sbjct: 426 RFNIE--DVTAGDDYAAMHQALTRRYGRIKDGE-----GKLPDVLLVDGGKGQLNMARDV 478

Query: 511 LAEIGVEDVPLVGVAKGPDRDAGRERFFVPG-RPPFMLRHNDPVLYFIQRLRDEAHRFAI 569
           + E+G  D+ L+GVAKG  R AG E  ++      F L+ +   L+ IQ++RDEAHRFAI
Sbjct: 479 MQELGFTDLTLLGVAKGVTRKAGFETLYLNDVHHEFTLKGDSSALHLIQQIRDEAHRFAI 538

Query: 570 GSHRTRRSKAIGVSPLDSVPGIGASRKKALLHHFGSAKAVSQAGLTDLEAVEGISAALAK 629
             HR RR KA  VS L+ V G+G  R++ LL HFG  + +++A + ++    GIS  LA+
Sbjct: 539 TGHRARRGKARRVSSLEDVAGVGPKRRRDLLKHFGGLQELNRASIDEIAKAPGISKKLAE 598

Query: 630 KLYDHFHSE 638
            +Y   HSE
Sbjct: 599 SIYASLHSE 607