Pairwise Alignments

Query, 639 a.a., Excinuclease ABC, C subunit (NCBI) from Rhodospirillum rubrum S1H

Subject, 626 a.a., excinuclease ABC subunit UvrC from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  633 bits (1632), Expect = 0.0
 Identities = 334/627 (53%), Positives = 434/627 (69%), Gaps = 14/627 (2%)

Query: 16  DQPDAGADPATPRGVEAIRAALRTMPSSPGVYRMIDGKGDVLYVGKARNLKRRVINYTQP 75
           + PD+    A     EA RA     P  PGVYRM    G  LYVGKA++LK+R+I Y Q 
Sbjct: 4   ETPDSQLKAAALIADEARRA-----PDKPGVYRMYGEDGSCLYVGKAKSLKKRIIQYAQG 58

Query: 76  HRLPVRIQRMIAATLTMEVLTTHTEAEALLLESNLIKKLKPRYNILLRDDKSFPYIEITS 135
                RI  M++ T +ME++ T TE EALLLESN IKKLKPR+N++LRDDKSF  + I  
Sbjct: 59  RFHTQRIGLMVSQTRSMELVVTATETEALLLESNFIKKLKPRFNVVLRDDKSFAELMIRR 118

Query: 136 DHAFPRIVKFRGTLRKGGEYFGPFASAGAVTSTLTALQKTFLLRTCADNVFASRSRPCLL 195
           DH  P++ K RG     G+YFGPFAS  AV  TL  LQK FLLR+C+D+V+ +R+RPC+L
Sbjct: 119 DHRAPQVRKHRGAHTTPGDYFGPFASTWAVNRTLNTLQKAFLLRSCSDSVYETRTRPCML 178

Query: 196 FQIKRCAAPCVDRVAEADYKALVEEARAFLSGSSKALQHDLAKRMDEAAQALDYEQAAIF 255
            QIKRC+APC   ++  DY  LV EA  FL G S+A+   L+K M  A+  +D+EQAA  
Sbjct: 179 HQIKRCSAPCTGLISLEDYGELVTEAEQFLRGKSRAVIGRLSKEMQAASDEMDFEQAARV 238

Query: 256 RDRIKALTNVQSHQDINLPTLGEADVIACHQAGGQTCVQVFFFRGGRNNGNRSFFPAHAG 315
           RDRI+AL+ +     ++  ++ E DV A H  GGQ CVQVFF+R G+N G R++FP    
Sbjct: 239 RDRIRALSAIAMENSVSADSVAEGDVFALHSDGGQACVQVFFYRAGQNWGGRAYFPRVDK 298

Query: 316 DEGLPEVLEAFLGQFYAGFPPPREILLLTDIPHHDL--VEQALCLRAGHRVRLVVPRRGS 373
            +  PE+L AFLGQFY   P PR  L+L+++  H+L  +E+A  ++A  +V +V P RG 
Sbjct: 299 TDTDPEILAAFLGQFYEDKPIPR--LILSNVRPHELELLEEAFSMKADRKVEIVRPMRGE 356

Query: 374 RRKLIDHALANAREALGRRLAESSAQRTLLEGTAVAFGLDGPLQRVEIYDNSHISGTHAV 433
           +  L+DHAL NAREALGRRLAESSAQ  +L+    AFGL+   +R+EIYDN+HI GT+AV
Sbjct: 357 KLALVDHALTNAREALGRRLAESSAQGKILDEVCEAFGLESRPERIEIYDNAHIQGTNAV 416

Query: 434 GGMVVAGPEGFMKAAYRKFNIRSPDITPGDDYAMMREVMIRRFARARKEDPDRD-RGQ-- 490
           GGMVVAGPEGF K+ YRKFNIR  D+TPGDDY MMREVM RRF+R  K++ + + +G+  
Sbjct: 417 GGMVVAGPEGFQKSQYRKFNIRGEDLTPGDDYGMMREVMRRRFSRLIKDEEEGEAKGEDV 476

Query: 491 -WPDLVLIDGGLGQLNAVREALAEI-GVEDVPLVGVAKGPDRDAGRERFFVPGRPPFMLR 548
             PDL+LIDGG GQL  V   +A++ G++D+ +VGVAKGPDRDAG E+FF+PG+ PFML 
Sbjct: 477 VRPDLLLIDGGAGQLAEVLAVMADLGGLDDITVVGVAKGPDRDAGLEKFFMPGKAPFMLP 536

Query: 549 HNDPVLYFIQRLRDEAHRFAIGSHRTRRSKAIGVSPLDSVPGIGASRKKALLHHFGSAKA 608
              P LY++QRLRDEAHRFA G+H  RRS  I  +PLD + G+G  RKKALLH FGSAK 
Sbjct: 537 LKSPALYYLQRLRDEAHRFANGAHAKRRSMDIKKNPLDEIEGVGPGRKKALLHAFGSAKG 596

Query: 609 VSQAGLTDLEAVEGISAALAKKLYDHF 635
           VS+A L DL  V+GI+  LA++++  F
Sbjct: 597 VSRASLADLVKVDGINQPLAERIHAFF 623