Pairwise Alignments

Query, 362 a.a., Porin, Gram-negative type (NCBI) from Rhodospirillum rubrum S1H

Subject, 369 a.a., Outer membrane protein (porin) from Enterobacter asburiae PDN3

 Score = 56.2 bits (134), Expect = 1e-12
 Identities = 79/314 (25%), Positives = 121/314 (38%), Gaps = 61/314 (19%)

Query: 9   KKVLFGTTMLVAAGAFAGAAVAADPITLKLGGKQEQY--FGGVASTKDGGREDGFGIDTD 66
           +KVL    +++ A   AG+A AA+ I  K G K + Y    G+    D    DG    T 
Sbjct: 3   RKVL---ALMIPALLMAGSAHAAE-IYNKDGNKLDLYGKVDGLHYFSDNKGADGD--QTY 56

Query: 67  TEVYFSGSTTLDNGITVAARIELEAEADNANNADKQ-WVTVS------GAFGKIEAGQRS 119
             + F G T ++N +T  A+ E   +A+N   +D Q W  ++      G +G  + G+  
Sbjct: 57  MRLGFKGETQINNTMTGYAQWEYNIQANNTEGSDNQSWTRLAFAGVKVGDYGSFDYGRNY 116

Query: 120 GVF---DEFMVVAPTVGSVSLDDSKSWL-GAGNGINGSVTQLYLDQSLDDDDAKVTYVTP 175
           GV    + +  + P  G  S   + +++ G  NG+                    TY   
Sbjct: 117 GVLYDVEGWTDMLPEFGGDSYTKADNFMTGRANGV-------------------ATYRNT 157

Query: 176 QFYGFSAGVSYTPNVGGPRANNSSIVAPTKKNRDLVQMAVGYDAEFGDVGLKASAAAATQ 235
            FYG   G+++     G   + S+    T   RD          E GD G   S      
Sbjct: 158 DFYGLVQGLNFALQYQGKNEDASNNQEGTNNGRDTRH-------ENGD-GFGISTT---- 205

Query: 236 SNLWIYQGGVNVSYAGFTLGGAYTEYDDQSAAAVASWDADASEGRVWTAGLSYAVGPYSV 295
                Y  G+     G T G AYT   D++   V +  A   +   WTAGL Y      +
Sbjct: 206 -----YDFGM-----GITAGAAYTS-SDRTNEQVMNTTAGGDKADAWTAGLKYDANNIYL 254

Query: 296 GFTYGQTDNDSKSG 309
              Y +T N +  G
Sbjct: 255 AAMYSETRNMTPYG 268