Pairwise Alignments

Query, 605 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

Subject, 565 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

 Score =  137 bits (344), Expect = 2e-36
 Identities = 137/530 (25%), Positives = 224/530 (42%), Gaps = 96/530 (18%)

Query: 5   RYPA-----VNYETCGNLLAMFLAQAERFGERPFLWSKSEGGYAPWSWASVHDQVIALAN 59
           +YPA     +N +   N+ A+     +RF ++P         ++       + ++ AL+ 
Sbjct: 9   KYPAGITAEINPDEFPNIQAVLKQSCQRFADKP--------AFSNLGKTITYGELYALSG 60

Query: 60  AMI-----DQGLAPGDRVVLASENRPDWTIADLAILAAGAIPVPAYATHTEADHLHVLDN 114
           A          L PGDR+ +   N   + +A    + AG I V     +T  +  H   N
Sbjct: 61  AFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQF-N 119

Query: 115 VEAAMAIVSTPLVAERFLRAAARAKRRPLVVMMDFD----------DAVVVPAGLTVLAW 164
              A A+V    +A    +   + + R ++V    D          ++V+      V A+
Sbjct: 120 DSGAKALVCLANMAHLAEKVVPKTQVRHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAY 179

Query: 165 NAMMAE------GEGRGVPAVVHRIQTDDLASIIHTSGTGGTPKGVMLAHRSILHNCHGA 218
           N   A         G+G P      Q +D+A + +T GT G  KG ML HR+++ N    
Sbjct: 180 NLPQAVRFNDALALGKGQPVTEANPQANDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQC 239

Query: 219 FKLLETIGLEE--EVFLSFLPLCHSYEHTTGLFFPISLGAQVYFAEGAETLAANMVEAKP 276
             L+ +  L E  E+ ++ LPL H Y  T      + +G              N++ + P
Sbjct: 240 RALMGS-NLHEGCEILITPLPLYHIYAFTFHCMAMMLIGNH------------NVLISNP 286

Query: 277 TIMTAVPRLYEMMRARILRAVEKEGGLKEKMFREAVDLGRRRMDDPASLGVKDKLTDAAL 336
                          R L A+ KE             LG+ +      L     L  A  
Sbjct: 287 ---------------RDLPAMVKE-------------LGKWKFSGFVGLNT---LFVALC 315

Query: 337 DKLVRHAVKARFGGRLKAMISGGGPLNPDVGYFFRAL-GIPVLQGYGLTETAPVVSCNMP 395
           +     A +A     LK  +SGG  L   V   ++A+ G  + +GYG+TET+PV + N  
Sbjct: 316 NN---EAFRALDFSALKITLSGGMALQLSVAERWKAVTGCAICEGYGMTETSPVAAVNPS 372

Query: 396 KKVKMNTVGPALYGVDIRIASD----------GEILVKGPLVMDGYWNDPESTRAVLDPD 445
           +  ++ T+G  +     ++  D          GE+ VKGP VM GYW   ++T  +LD +
Sbjct: 373 EANQVGTIGIPVPSTLCKVIDDAGNELPLGEVGELCVKGPQVMKGYWQREDATAEILDSE 432

Query: 446 GWLHTGDVGTLDEDGFIQITDRKKDLIVNSGGHNISPQRVEGILGLEPEI 495
           GWL TGD+  +  DG+++I DRKKD+I+ S G N+ P  +E +L   P +
Sbjct: 433 GWLKTGDIAVIQADGYMRIVDRKKDMILVS-GFNVYPNELEDVLAALPGV 481