Pairwise Alignments

Query, 324 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 313 a.a., peptide ABC transporter from Pseudomonas simiae WCS417

 Score =  173 bits (438), Expect = 6e-48
 Identities = 112/321 (34%), Positives = 176/321 (54%), Gaps = 9/321 (2%)

Query: 1   MLTALASRFAQMIFVLVGISMIVFLIFFATPGSDPAARIAGRNASQETLQVVRHDFGLDR 60
           ML  +  + A  +  L+ IS++VF +    PG DPA  + G  A  ++L  +RH  GLD 
Sbjct: 1   MLRFILQKLAMAVPTLLLISVMVFALIRLIPG-DPALLMLGDMADPQSLADMRHTLGLDH 59

Query: 61  PLPVQYALMMKRLFITGDLTSFVNRGQKVVPTVVNAIPVTLSLVLGAGVLWVVGGVVVGV 120
            L  Q+ +  K + ++ DL   ++  Q V+P +++   V+ ++VL A +   +  V +G+
Sbjct: 60  SLVTQFLIWFKAV-LSFDLGFSISTKQAVLPLILDRFSVSATIVLVAVLFATLIAVPIGL 118

Query: 121 LAAMTRGRWLDRVLMILGLIGVSMPVFWLGEVANLVSQSRFHDTFLFSWVPALGYKPFSE 180
           +AA  +   LD  L+ +  + +S+P FWLG    L+    F       W+P +GY  FS+
Sbjct: 119 IAAWKQNSALDLGLVSIATLLLSIPSFWLG----LLLLHAFG--IQLGWLPVVGYVSFSQ 172

Query: 181 DPAGWFKTLVIPWFTLATLYVGLYGRVLRASLIEVLQEDFIRTARAKGLSERRILLRHGL 240
            P      +V+P  TL  + VG   R+ RAS IEVL+ ++I  ARAKGLSER +L +H L
Sbjct: 173 APWQAMSYMVLPVVTLTLVEVGAITRMARASTIEVLRLEYIAHARAKGLSERAVLWKHAL 232

Query: 241 RSSLVAFVTMFGLDFGALVGGGALLAEVVFGLQGVGKVTYDAMQNLDLPTIMATVIYASF 300
            ++     T+ GL  G L+GG A+L E VF L G+G++  DA+   D P +   ++  +F
Sbjct: 233 PNAFAPTWTLVGLILGNLLGGIAVL-ETVFTLPGIGRLMVDAIFARDYPVLQGCLLLITF 291

Query: 301 FVVFANFIVDVLYAFLDPRVR 321
             V  N  VD+LY   DPRV+
Sbjct: 292 IYVLVNLCVDLLYPLFDPRVK 312