Pairwise Alignments

Query, 324 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 328 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  197 bits (501), Expect = 3e-55
 Identities = 115/330 (34%), Positives = 190/330 (57%), Gaps = 18/330 (5%)

Query: 1   MLTALASRFAQMIFVLVGISMIVFLIFFATPGSDPAARIAGRNA--SQETLQVVRHDFGL 58
           +L   ASR  Q + +++ + ++ F++  A PG DP   IAG +   S E +  +R  +GL
Sbjct: 6   LLRHAASRLLQALGLVLAVVVLNFVLVHAAPG-DPVETIAGASGGMSPELMAQLRTQYGL 64

Query: 59  DRPLPVQYALMMKRLFITGDLTSFVNRGQKVVPTVVNAIPVTLSLVLGAGVLWVVGGVVV 118
           D+ LPVQ A+ + ++   GDL         V   +   +P TL LVL + +L    G  +
Sbjct: 65  DKSLPVQLAVYLGKV-AQGDLGYSYFFNLPVTQMIGERLPATLLLVLSSVLLAFFAGTAL 123

Query: 119 GVLAAMTRGRWLDRVLMILGLIGVSMPVFWLGEVANLVSQSRFHDTFLFSWVPALGYKPF 178
           GVL++     WL + + +L L+G + PVFWLG +  ++  S      +F  +P  G +  
Sbjct: 124 GVLSSRKPNGWLSQFITVLSLVGFAAPVFWLGIMLVILLAS------VFPILPVAGMRSI 177

Query: 179 SEDPAGWF-------KTLVIPWFTLATLYVGLYGRVLRASLIEVLQEDFIRTARAKGLSE 231
               AG F       + LV+P  TL+ +Y+  Y R+ R+S+++VL  DFIRTARAKGL++
Sbjct: 178 DSTGAGGFADMLDVAQHLVLPTLTLSLVYLAQYSRLARSSMLDVLGSDFIRTARAKGLAD 237

Query: 232 RRILLRHGLRSSLVAFVTMFGLDFGALVGGGALLAEVVFGLQGVGKVTYDAMQNLDLPTI 291
           R +L +H LR++L+  VT+ GL FG ++  GA+L E VF   G+G++ ++++   D PTI
Sbjct: 238 RVVLYKHALRNALLPVVTVLGLQFGNVL-AGAILVETVFNWPGLGRLAFESVLRRDYPTI 296

Query: 292 MATVIYASFFVVFANFIVDVLYAFLDPRVR 321
           +  ++++S  VV  N + D+ Y F+DPR++
Sbjct: 297 LGVLLFSSIVVVVMNQLTDLCYRFIDPRIK 326