Pairwise Alignments

Query, 324 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 306 a.a., predicted peptide transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  182 bits (462), Expect = 9e-51
 Identities = 110/321 (34%), Positives = 175/321 (54%), Gaps = 17/321 (5%)

Query: 1   MLTALASRFAQMIFVLVGISMIVFLIFFATPGSDPAARIAGRNASQETLQVVRHDFGLDR 60
           ML  +  R   +I  L  +S++VFL     PG DPA  IAG  A  + +++VR   GLD+
Sbjct: 1   MLNYVIKRLLGLIPTLFIVSVLVFLFVHMLPG-DPARLIAGPEADAQVIELVRQQLGLDQ 59

Query: 61  PLPVQYALMMKRLFITGDLTSFVNRGQKVVPTVVNAIPVTLSLVLGAGVLWVVGGVVVGV 120
           PL  Q+   +    + GD    +   + V   + +    TL L + + V  V+ G+  G+
Sbjct: 60  PLYHQFWHYISNA-VQGDFGLSMVSRRPVADEIASRFMPTLWLTITSMVWAVIFGMAAGI 118

Query: 121 LAAMTRGRWLDRVLMILGLIGVSMPVFWLGEVANLVSQSRFHDTFLFSWVPALGYKPFSE 180
           +AA+ R RW DR+ M + + G+S P F LG +   V            W+P +G      
Sbjct: 119 IAAVWRNRWPDRLSMTIAVSGISFPAFALGMLLIQVFSVEL------GWLPTVG------ 166

Query: 181 DPAGWFKTLVIPWFTLATLYVGLYGRVLRASLIEVLQEDFIRTARAKGLSERRILLRHGL 240
             A  ++  ++P  TL      +  R  RAS ++VL ED++RTARAKG+SE  ++L+HGL
Sbjct: 167 --ADSWQHYILPSLTLGAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWVVLKHGL 224

Query: 241 RSSLVAFVTMFGLDFGALVGGGALLAEVVFGLQGVGKVTYDAMQNLDLPTIMATVIYASF 300
           R++++  VTM GL FG L+ GG+++ E VF   G+G++  D+++  D P I A ++  S 
Sbjct: 225 RNAMIPVVTMMGLQFGFLL-GGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLFSL 283

Query: 301 FVVFANFIVDVLYAFLDPRVR 321
             +  N +VDVLYA ++P +R
Sbjct: 284 EFILINLVVDVLYAAINPAIR 304