Pairwise Alignments

Query, 324 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 317 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  177 bits (448), Expect = 4e-49
 Identities = 107/323 (33%), Positives = 175/323 (54%), Gaps = 11/323 (3%)

Query: 1   MLTALASRFAQMIFVLVGISMIVFLIFFATPGSDPAARIAGRNASQETLQVVRHDFGLDR 60
           M T L  R  Q++ +L  IS++ FL+    PG   AA I  R A ++ ++ +R   GLD+
Sbjct: 1   MNTLLTRRLLQLLPMLFFISLVAFLLVKLAPGDPVAAYITPRMAPED-IERIRQSLGLDK 59

Query: 61  PLPVQYALMMKRLFITGDLTSFVNRGQKVVPTVVNAIPVTLSLVLGAGVLWVVGGVVVGV 120
           PL  QY L +K + + GDL   +   + V+  +   IP TL L+  + ++ +V  + +G+
Sbjct: 60  PLVTQYVLWLKNV-LRGDLGYSLIYHRPVLEMIGERIPATLGLMGASLLMAIVLAIPLGL 118

Query: 121 LAAMTRGRWLDRVLMILGLIGVSMPVFWLGEVANLVSQSRFHDTFLFSWVPALGYKPFSE 180
           LA   + RWLD +L +   IG+S+P+FW G +   V   + +      W P++G +    
Sbjct: 119 LAGAFKHRWLDHLLNLFAYIGISVPIFWFGILLITVFAVQLN------WFPSMGMRTIGM 172

Query: 181 DPAGW--FKTLVIPWFTLATLYVGLYGRVLRASLIEVLQEDFIRTARAKGLSERRILLRH 238
           +  G    +  V+P   L    +  Y R +R++ I  L  D+++T  A G +   IL RH
Sbjct: 173 EDNGLDLLRHGVLPCIALTFYNLSSYVRYIRSNTISQLSADYVQTQLAYGATRSSILFRH 232

Query: 239 GLRSSLVAFVTMFGLDFGALVGGGALLAEVVFGLQGVGKVTYDAMQNLDLPTIMATVIYA 298
            L++ L+  +T+FGL FG L+ G A + E VF   G+G +   ++ +LD P IMA ++ +
Sbjct: 233 VLKNVLLPVITLFGLSFGELIVG-AYVTESVFSWPGMGLLGIQSIASLDYPLIMAIIMLS 291

Query: 299 SFFVVFANFIVDVLYAFLDPRVR 321
           S  ++  N I DVLY F DPR+R
Sbjct: 292 SMMLIVGNLIADVLYRFADPRIR 314