Pairwise Alignments

Query, 324 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 306 a.a., ABC transporter permease subunit from Dickeya dianthicola ME23

 Score =  179 bits (454), Expect = 8e-50
 Identities = 116/322 (36%), Positives = 174/322 (54%), Gaps = 19/322 (5%)

Query: 1   MLTALASRFAQMIFVLVGISMIVFLIFFATPGSDPAARIAGRNASQETLQVVRHDFGLDR 60
           M   +  R  +MI VL+ IS++VF      PG DPA   AG +A  E ++  R   GL+ 
Sbjct: 1   MFVYIVRRLLEMIPVLLVISLLVFGFIKLLPG-DPARIYAGPDAPIEAVEAARERLGLND 59

Query: 61  PLPVQYALMMKRLFITGDLTSFVNRGQKVVPTVVNAIPVTLSLVLGAGVLW-VVGGVVVG 119
           PLP QY   +  L + GDL       Q V+  +  +   TL L L AG  W V+ G+++G
Sbjct: 60  PLPQQYLNWLDGL-VHGDLGITYRTQQPVLSVIQKSFMPTLWLAL-AGFAWSVLLGLLIG 117

Query: 120 VLAAMTRGRWLDRVLMILGLIGVSMPVFWLGEVANLVSQSRFHDTFLFSWVPALGYKPFS 179
           V AA+ RG+W D  LM L + G+SMP FWLG               L     A+ +  FS
Sbjct: 118 VFAALKRGKWQDWSLMSLAVGGISMPPFWLG--------------LLLIQFVAMPFGVFS 163

Query: 180 EDPAGWFKTLVIPWFTLATLYVGLYGRVLRASLIEVLQEDFIRTARAKGLSERRILLRHG 239
                    +++P  TL      +  R  R++ +EV QED++RTARAKGL +R I+ +H 
Sbjct: 164 VSGYNKPADIILPALTLGASVAAVMARFTRSAFLEVTQEDYVRTARAKGLRQRLIVWKHV 223

Query: 240 LRSSLVAFVTMFGLDFGALVGGGALLAEVVFGLQGVGKVTYDAMQNLDLPTIMATVIYAS 299
           +R++L+  +TM GL FG L+ GG+++ E VF   G+G +  ++++  D P I A V+   
Sbjct: 224 MRNALIPVITMLGLQFGFLL-GGSIVVESVFNWPGLGWLLIESIKTQDQPVIQALVMLFV 282

Query: 300 FFVVFANFIVDVLYAFLDPRVR 321
           F  +  N +VD+LYA ++P +R
Sbjct: 283 FEFILINLLVDLLYAVVNPAIR 304