Pairwise Alignments

Query, 511 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

Subject, 441 a.a., Transcriptional regulatory protein ZraR from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  305 bits (782), Expect = 2e-87
 Identities = 178/449 (39%), Positives = 259/449 (57%), Gaps = 19/449 (4%)

Query: 55  ILLVEDTPVQARTYLDYLDGGPWTIEHVETGAEALAVLERRPPSLMLLDIHLPDMDGMEI 114
           IL+V+D           L G  + +    +G +AL  +  +   L+L D+ + +MDG+  
Sbjct: 8   ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIAT 67

Query: 115 LRRVRSLPLSMGVVMITSNASISLAVAAMQAGANDFLVKPFSRDRLMVTLRNVIDNQRLS 174
           L+ +++L  ++ V+++T+ +S+  AV A++ GA D+L+KP   D L  TL   + +   S
Sbjct: 68  LKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTH-S 126

Query: 175 REVETLRENLGIAAFQ-GFVGSSAAMQRVYRLIEASAASTATVFITGESGSGKELAAEAL 233
            + ET      + A Q G VG S+AMQ +   I   A S ATV I G+SG+GKEL A A+
Sbjct: 127 IDAETP----AVTASQFGMVGKSSAMQHLLSEIALVAPSEATVLIHGDSGTGKELVARAI 182

Query: 234 HRYGPRVKGPFVALNCGAIPRELMESEVFGHVRGSFTGAVSDRDGAAAQANGGTLFLDEI 293
           H    R + P V LNC A+   L+ESE+FGH +G+FTGA   R+G   +A+GGTLFLDEI
Sbjct: 183 HASSARSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEI 242

Query: 294 CEMDPNLQTKLLRFLQTGMVQKVGGDRPEKVDVRIVCATNRDPLEEVKAGRFREDLYYRL 353
            ++ P +Q +LLR +Q   VQ+VG ++   VDVR++ AT+RD   EV AG FR+DLYYRL
Sbjct: 243 GDISPMMQVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAAEVNAGHFRQDLYYRL 302

Query: 354 HVIPIRLPALRDREGDVLEIADHFLASIATEEKKSFRGFSPAVAQALLAYDWPGNVRQLI 413
           +V+ I +P+LR R  D+  +A HFL   A   +K+ +GF+P     L+ YDWPGN+R+L 
Sbjct: 303 NVVAIEVPSLRQRREDIPLLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRELE 362

Query: 414 NVLRNVVVLNNGPEVTLGMLPQAIADADGEAIAGEAAEGESPALFRQQDIEPLWVVEKRA 473
           N +   VVL  G  ++   LP AIA             G    L + QDI+PL  VEK  
Sbjct: 363 NAVERAVVLLTGEYISERELPLAIA-------------GTPIPLGQSQDIQPLVEVEKEV 409

Query: 474 VERAIGACGGNIPRAAALLRVSPSTLYRK 502
           +  A+   GGN   AA  L ++  TL  K
Sbjct: 410 ILAALEKTGGNKTEAARQLGITRKTLLAK 438