Pairwise Alignments

Query, 511 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

Subject, 444 a.a., Transcriptional regulatory protein GlrR from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  284 bits (727), Expect = 4e-81
 Identities = 166/447 (37%), Positives = 250/447 (55%), Gaps = 24/447 (5%)

Query: 55  ILLVEDTPVQARTYLDYLDGGPWTIEHVETGAEALAVLERRPPSLMLLDIHLPDMDGMEI 114
           +LLV+D P   +     L    +++   E+GAE L VL R    L++ D+ + +MDGM++
Sbjct: 8   LLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLNREKVDLVISDLRMDEMDGMQL 67

Query: 115 LRRVRSLPLSMGVVMITSNASISLAVAAMQAGANDFLVKPFSRDRLMVTLRNVIDNQRLS 174
              ++ +   M V+++T++ SI  AVAA Q G   FL KP  +D L   + + ++    +
Sbjct: 68  FAEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDALYQAIDDALEQSAPA 127

Query: 175 REVETLRENLGIAAFQGFVGSSAAMQRVYRLIEASAASTATVFITGESGSGKELAAEALH 234
            + E  RE +        V  S  M R+       A S  +V I G+SG+GKE+ A+A+H
Sbjct: 128 TD-ERWREAI--------VTRSPLMLRLLEQARLVAQSDVSVLINGQSGTGKEIFAQAIH 178

Query: 235 RYGPRVKGPFVALNCGAIPRELMESEVFGHVRGSFTGAVSDRDGAAAQANGGTLFLDEIC 294
              PR   PF+A+NCGA+P +L+ESE+FGH RG+FTGAVS+R+G    A GGTLFLDEI 
Sbjct: 179 NASPRNSKPFIAINCGALPEQLLESELFGHARGAFTGAVSNREGLFQAAEGGTLFLDEIG 238

Query: 295 EMDPNLQTKLLRFLQTGMVQKVGGDRPEKVDVRIVCATNRDPLEEVKAGRFREDLYYRLH 354
           +M   LQ KLLR LQ   V+ +G +R   +DVRI+ AT+RD  + +  G FREDLYYRL+
Sbjct: 239 DMPAPLQVKLLRVLQERKVRPLGSNRDIDIDVRIISATHRDLPKAMARGEFREDLYYRLN 298

Query: 355 VIPIRLPALRDREGDVLEIADHFLASIATEEKKSFRGFSPAVAQALLAYDWPGNVRQLIN 414
           V+ +++PAL +R  D+  +A+H L   A   K   R FS    + L+   WPGNVRQL+N
Sbjct: 299 VVSLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVN 358

Query: 415 VLRNVVVLNNGPEVTLGMLPQAIADADGEAIAGEAAEGESPALFRQQDIEPLWVVEKRAV 474
           V+   V L + P ++             +A+  +A EGE+ AL     +E     E   +
Sbjct: 359 VIEQCVALTSSPVIS-------------DALVEQALEGENTAL--PTFVEARNQFELNYL 403

Query: 475 ERAIGACGGNIPRAAALLRVSPSTLYR 501
            + +    GN+  AA +   + +  Y+
Sbjct: 404 RKLLQITKGNVTHAARMAGRNRTEFYK 430