Pairwise Alignments

Query, 296 a.a., MotA/TolQ/ExbB proton channel (NCBI) from Rhodospirillum rubrum S1H

Subject, 320 a.a., Biopolymer transport protein ExbB from Pseudomonas putida KT2440

 Score =  142 bits (358), Expect = 1e-38
 Identities = 99/260 (38%), Positives = 136/260 (52%), Gaps = 7/260 (2%)

Query: 9   AAPLSGALSAGASPDGPTGMVATGGGGLDGAAQGLPAPGLPGLDTAADGSLNAVGDALGG 68
           A  LS  L+  A  D PT   AT       A         P  D  A     A   ++  
Sbjct: 21  ALTLSLVLAPVAMADEPTTNAATPAAATAPATPAAAPADAPAPDATASNPA-AADPSVQA 79

Query: 69  LVAPVAPAL-HDFSALGLFLQADPVVKGVMGLLVVASIAVWAVILDKAVRLVIARREARA 127
           LV   +  + HD S  G++  AD VVK VM  L +ASI  W + + K   L+ A+R  R 
Sbjct: 80  LVEDTSLGMAHDLSPWGMYKNADIVVKIVMIGLAIASIITWTIWIAKGFELMGAKRRLRG 139

Query: 128 ----FERAVAANDLSAVMLKGG-MATTVVRSAHEAWQDYQPGEARSVRRDGIERAMRLTV 182
                +++    + S V  K G +A T+V  A E  +       +   ++ +   +   V
Sbjct: 140 EIAQLKKSTTLKEASEVTNKEGTLAHTLVHDALEEMRLSANAREKEGIKERVSFRLERLV 199

Query: 183 NAELRKLEVGLPLLASVGSAAPFVGLFGTVWGIMHSFTSIAQSNDTSLAVVAPGIAEALF 242
           +A  R +  G  +LA++GS APFVGLFGTVWGIM+SF  IA++  T+LAVVAPGIAEAL 
Sbjct: 200 HASGRTMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 259

Query: 243 ATAIGLVAAIPAVLAFNALS 262
           ATA+GLVAAIPAV+ +N  +
Sbjct: 260 ATALGLVAAIPAVVIYNVFA 279