Pairwise Alignments

Query, 831 a.a., Penicillin-binding protein 1A (NCBI) from Rhodospirillum rubrum S1H

Subject, 773 a.a., transglycosylase/transpeptidase from Pseudomonas putida KT2440

 Score =  152 bits (385), Expect = 5e-41
 Identities = 117/356 (32%), Positives = 170/356 (47%), Gaps = 31/356 (8%)

Query: 428 GLRQMPNVEGALVAMDPHTGRVMAMVGGFAPERSEFNRAIQAKRQPGSSFKPFVYLAALD 487
           G +   +VE A+V  +P TG V A++G      + FNRAI A R  GS  KP VYL AL+
Sbjct: 419 GRKGADDVEAAMVVTNPETGEVQALIGSRQAGFAGFNRAIDAVRPIGSLVKPSVYLTALE 478

Query: 488 HG--YTPATIILDAPFVYDPGPGQPLWKPKNYSGQFYGPSTLRRGVEMSRNLMTVRLANA 545
               YT  + + D PF      GQ +W+P+NY  + +G   L +G+  S NL T +L   
Sbjct: 479 QPSKYTLTSWVQDEPFSVKGADGQ-VWRPQNYDRRPHGTIYLYQGLANSYNLSTAKLGLE 537

Query: 546 VGMDVVAEYAERFGVVHTMPRVLAASLGAVETTVMDMTTAYAMLVNGGRRIAPTLIDRIQ 605
           VG+  V +   R GV    P   A  LGA   + M + T Y  + NGG       I  + 
Sbjct: 538 VGVPNVIKTIGRLGVNVDWPAFPAMLLGAGGMSPMQVATMYQTIANGGFNTPMRGIRSVL 597

Query: 606 DRTGTTVYRHDERPCDACKASQWAGQAVPAVVDNREIMTDPLSAYQIVSILQGVVQRGTG 665
              G  + R+                  P  +       DP + Y + + +Q V++ GTG
Sbjct: 598 TAEGEPLKRY------------------PFQIQQT---FDPGAIYLVQNAMQRVMREGTG 636

Query: 666 GKVQAV---GKSVAGKTGTSNDSLDTWFVGFSPDLVCGVFVGFDEPKSLGSHEAGSTTAA 722
             V        ++AGKTGTSNDS D+WF GFS DL+  V++G D+     +   G+T A 
Sbjct: 637 RSVYNTLPRSLTLAGKTGTSNDSRDSWFSGFSQDLLAVVWMGRDDNGK--TPFTGATGAL 694

Query: 723 PIFTTFMKEALADKPDIPFRVPEGIKFVRIDPQTGQRAGPGTSNAILEAFKPGSEP 778
            ++T+FMK+A     D+P   P+ +    IDP +G  +      A+   +  GSEP
Sbjct: 695 QVWTSFMKKADPLPLDMP--QPDNVVQAWIDPYSGHGSDASCPGAVQMPYIRGSEP 748



 Score =  149 bits (375), Expect = 8e-40
 Identities = 90/245 (36%), Positives = 141/245 (57%), Gaps = 12/245 (4%)

Query: 61  IEKRVYVPINAIPQKVKDAFLSAEDKNFYTHSGVDFVGLFRAVLTNLQNYGSGRRPVGAS 120
           +E R+ + I+ +P+ + +  ++ ED+ FY+H GV    + RA+  N     SG    G S
Sbjct: 165 LEDRILIKIDQVPKYLLETLVATEDREFYSHFGVSPKSIVRAMWVNTS---SGSMRQGGS 221

Query: 121 TITQQVAKNFLLTNEVSFDRKVKEAILAFRIEEAFSKDHILELYLNEIYLGFSS----YG 176
           T+TQQ+ KNF L++E S  RK+ EA++A  +E  + K  ILE YLNE+++G       +G
Sbjct: 222 TLTQQLVKNFYLSSERSLSRKLTEAMMAVLLELHYDKREILEAYLNEVFVGQDGQRAVHG 281

Query: 177 VAAAAVNYFNKSLDELTIGEVAFLAALPKAPNNYNPVRKNDAAKARRDWVVDRMVEDDHI 236
              A+  +F++ L EL + ++A L  + K P+ YNP R  + A ARR+ V+D + E    
Sbjct: 282 FGLASQFFFSQPLSELKLHQIALLVGMVKGPSYYNPRRHPERALARRNLVLDLVAEQGVA 341

Query: 237 TQAEGEAAKAEPLEVRSRDETQLVRHADF--FSEEVRRQLQSRYGEEALYKGGLYVRTTL 294
           +QAE +AAK  PL V  R     +  + F  F + V+RQL+  Y +E L + GL + T+ 
Sbjct: 342 SQAEVDAAKKMPLGVTKRGS---LADSSFPAFLDLVKRQLRQDYRDEDLTEEGLRIFTSF 398

Query: 295 DPRLQ 299
           DP LQ
Sbjct: 399 DPILQ 403