Pairwise Alignments

Query, 485 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 567 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  184 bits (468), Expect = 5e-51
 Identities = 118/303 (38%), Positives = 178/303 (58%), Gaps = 8/303 (2%)

Query: 185 EDARKVAEERLRLEAAAAEAQVTAVRGVADDLEGSVGTALGALKDDSATMRRAAEALNGS 244
           E  R  AEE    + AA E++VTA+  +    +  +G  +G L + S+ +   A A++ +
Sbjct: 268 EADRLAAEEAT--QRAARESRVTALETLVGGFQDRIGGLVGKLTESSSGLETTARAMSEA 325

Query: 245 SESSRQVSSMARDLSERTAEGVESMAQAARTMTQSVSGILESVRHSDALSRSALTDTERA 304
           + ++   ++ A D     + GV ++A AA  ++ S+S I   V+ S  +++ A+      
Sbjct: 326 ARATDTQAATASDAVGSASMGVRTVAAAAEELSASISEISGKVQQSSEVTQKAMARAAET 385

Query: 305 TEKVAALSTAAERIGEVVGLISAVAAQTNLLALNATIEAARAGDAGKGFAVVANEVKTLA 364
            + V  L+  A+RIGEVV LI+A+A+QTNLLALNATIEAARAGDAGKGFAVVA EVKTLA
Sbjct: 386 DKMVGRLAEGADRIGEVVSLINAIASQTNLLALNATIEAARAGDAGKGFAVVAGEVKTLA 445

Query: 365 TQTARATDEIAAQVTGIQGATRDSAAVIATISRSMTDISATVSAIAAAMEDQGKASQLVA 424
            QTARAT+EI AQ+  IQ ATR++   I  IS ++ +I+  V ++A+A+E+Q  A+  +A
Sbjct: 446 NQTARATEEIGAQIGRIQEATRETIQAIKEISGTIGEINGIVMSVASAVEEQSAATAEIA 505

Query: 425 GTIDAVSSLAHELGEVISRMDGLTGDFSAN---AATMRGLSDHAVDEIDRLDQSVIAFVG 481
            T+  VS+      EV + +DG++    A    AA +   S         L   +  FVG
Sbjct: 506 RTVQRVST---NTDEVTTNVDGVSRTAKATDSAAADVLRASGDLTTVSGELGGEIDRFVG 562

Query: 482 RLR 484
            +R
Sbjct: 563 GVR 565



 Score = 49.3 bits (116), Expect = 3e-10
 Identities = 72/327 (22%), Positives = 133/327 (40%), Gaps = 33/327 (10%)

Query: 163 IVRMTTSFATAEQAVVEANTAREDARKVAEERLRLEAAAAEAQVTAVRGVADDLEGSVGT 222
           I R++   A AE+A+++  TA             +E A A  + T + G      G V  
Sbjct: 165 IRRLSGEIAGAEEALLKQRTAE------------MEEALALGRNTMIVG------GVVSV 206

Query: 223 ALGALKDDSATMRRAAEALNGSSESSRQVSSMARDLSERTAEGVESMAQAARTMTQSVSG 282
            L  L     T R   + +   +    ++S+  R ++    +  + + Q A+ +    +G
Sbjct: 207 VLAVLLGWQLT-RGIVQPVRLLTGVMGELSAGGRGVAIPETDRGDEIGQMAKAVEIFKAG 265

Query: 283 ILESVRHSDALSRSALTDTERATEKVAALSTAA----ERIGEVVGLISAVAAQTNLLALN 338
           ++E+    D L+    T       +V AL T      +RIG +VG ++  ++     A  
Sbjct: 266 LIEA----DRLAAEEATQRAARESRVTALETLVGGFQDRIGGLVGKLTESSSGLETTA-R 320

Query: 339 ATIEAARAGDAGKGFAVVANEVKTLATQT-ARATDEIAAQVTGIQGATRDSAAVIATISR 397
           A  EAARA D     A  A    ++  +T A A +E++A ++ I G  + S+ V      
Sbjct: 321 AMSEAARATDTQAATASDAVGSASMGVRTVAAAAEELSASISEISGKVQQSSEVTQKAMA 380

Query: 398 SMTDISATVSAIAAAMEDQGKASQLVAGTIDAVSSLAHELGEVISRMDGLTGDFSANAAT 457
              +    V  +A   +  G+    V   I+A++S  + L    +      GD     A 
Sbjct: 381 RAAETDKMVGRLAEGADRIGE----VVSLINAIASQTNLLALNATIEAARAGDAGKGFAV 436

Query: 458 MRGLSDHAVDEIDRLDQSVIAFVGRLR 484
           + G      ++  R  + + A +GR++
Sbjct: 437 VAGEVKTLANQTARATEEIGAQIGRIQ 463



 Score = 28.9 bits (63), Expect = 5e-04
 Identities = 47/198 (23%), Positives = 78/198 (39%), Gaps = 24/198 (12%)

Query: 284 LESVRHSDALSRSALTDTERATEKVAALSTAAERIGEVVGLISAVAAQTNLLALN--ATI 341
           LE  R + A+ R  L   +  T          + I     +     A+  +  +N   TI
Sbjct: 87  LEPYRANQAVFRELLQRAKTLTADNPEQQRRFDDIAAQAEIWRTRVAEREIALMNNAETI 146

Query: 342 EAARAGDAGKGFAVVANEVKTLATQTARATDEIAAQVTGIQGATRDSAAVIATISRSMTD 401
           EAARA +A     V  + ++ L+ + A A + +  Q T    A  + A     + R+   
Sbjct: 147 EAARALEASGAGKVPMDAIRRLSGEIAGAEEALLKQRT----AEMEEA---LALGRNTMI 199

Query: 402 ISATVSAIAAAMEDQGKASQLVAGTIDAVSSLAHELGEVISRMDGLTGDFSANAATMRGL 461
           +   VS + A +       QL  G +  V  L   +GE+ +   G+     A   T RG 
Sbjct: 200 VGGVVSVVLAVL----LGWQLTRGIVQPVRLLTGVMGELSAGGRGV-----AIPETDRG- 249

Query: 462 SDHAVDEIDRLDQSVIAF 479
                DEI ++ ++V  F
Sbjct: 250 -----DEIGQMAKAVEIF 262