Pairwise Alignments

Query, 485 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 559 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  168 bits (425), Expect = 5e-46
 Identities = 112/380 (29%), Positives = 192/380 (50%), Gaps = 11/380 (2%)

Query: 101 LAILVVLCDARVILAAALTIAAHHLILTYAMPAWVFPPGADLGRVALHAAIVIIETVTLV 160
           L+ +++L    V++   +      L+L  ++   +    A + R+A     V I  V  V
Sbjct: 185 LSRMILLIAVAVVIVMVVIFG---LLLRKSIAEPIIAMTAAMNRLADKDFAVAIPAVGRV 241

Query: 161 WVIVRMTTSFATAEQAVVEANTAREDARKVAEERLRLEAAAAEAQVTAVRGVADDLEGSV 220
             + RM ++  T +  ++ +     + R   E  +        A+   +  +  + + +V
Sbjct: 242 DEVGRMASAMQTFKDNMLRSEQMESEQRAAQERNV--------ARGKTIESLTRNFDEAV 293

Query: 221 GTALGALKDDSATMRRAAEALNGSSESSRQVSSMARDLSERTAEGVESMAQAARTMTQSV 280
            + L A+   S  M  AA+ ++ ++E + + + M    +E  +  V+++A AA  +  S+
Sbjct: 294 SSMLNAVSRASTDMEHAAQGMSATAEQTSRQAVMVAAATEEASSSVQTVASAAEELAASI 353

Query: 281 SGILESVRHSDALSRSALTDTERATEKVAALSTAAERIGEVVGLISAVAAQTNLLALNAT 340
             I   V  S  ++R A  +  +  + V  L+ ++ RIG+VV LI+ +A+QTNLLALNAT
Sbjct: 354 HEIGRQVTQSSTVARMAAEEASKTNQTVNGLAESSARIGDVVSLINDIASQTNLLALNAT 413

Query: 341 IEAARAGDAGKGFAVVANEVKTLATQTARATDEIAAQVTGIQGATRDSAAVIATISRSMT 400
           IEAARAGDAGKGFAVVA EVK LA QT RAT+EI+ Q+  +Q ATR +   I  I + + 
Sbjct: 414 IEAARAGDAGKGFAVVAGEVKNLANQTGRATEEISQQIAAVQEATRQAVDAIGGIVKRIE 473

Query: 401 DISATVSAIAAAMEDQGKASQLVAGTIDAVSSLAHELGEVISRMDGLTGDFSANAATMRG 460
           +I+   +AIA+A+E+Q  A+  +A  +   +S   E+   I  +     +    A  + G
Sbjct: 474 EINQISAAIASAVEEQSAATAEIARNVQQAASGTQEVSATIGGVTKAAEETGTAAVGVLG 533

Query: 461 LSDHAVDEIDRLDQSVIAFV 480
                  + D L   V  F+
Sbjct: 534 SIKSVNQQADALKGVVANFL 553