Pairwise Alignments

Query, 320 a.a., Protein of unknown function DUF6, transmembrane (NCBI) from Rhodospirillum rubrum S1H

Subject, 306 a.a., drug/metabolite exporter YedA from Escherichia coli ECOR27

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 77/297 (25%), Positives = 118/297 (39%), Gaps = 37/297 (12%)

Query: 16  LLLVSFIWGSAFVAQKTAFDAVEGATAPALGPLAFTGARFLLGALVVLPFALRENRQARS 75
           L  +  IWGS +   +   ++          PL   G RFL   +++L F L    +   
Sbjct: 13  LFALYIIWGSTYFVIRIGVESWP--------PLMMAGVRFLAAGILLLAFLLLRGHKLPP 64

Query: 76  R----GAPGAGLLAIFCGIGAVLFAASFTQQLGIIGTSVTNAGFLTALYVPLVPVVALVI 131
                 A   GLL +  G G V  A       GI    V          VPL  +    +
Sbjct: 65  LRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVAT--------VPLFTLCFSRL 116

Query: 132 FRQSVRKMIWPGAAGCLAGLWLLTGAATNGLSALTAGDLWVLVGALFWAFHVTVVGVMAT 191
           F    RK+ W G A  LAG+ +L       LS    G + +L+G++ WAF      V  +
Sbjct: 117 FGIKTRKLEWVGIAIGLAGIIMLNSGGN--LSGNPWGAILILIGSISWAFG----SVYGS 170

Query: 192 RSGRPLTLAAA--QFLTCGVLGW-----AGAFAFETPTLAGMAAIAPEIAYAGILSVGVA 244
           R   P+ + A   + L  GV+       AG      P+L+G  A+     Y  +    +A
Sbjct: 171 RITLPVGMMAGAIEMLAAGVVLMIASMIAGEKLTALPSLSGFLAVG----YLALFGSIIA 226

Query: 245 FTLQVVAQRHTHPAAAAIILSMEMVFASLAAVVVLGERLSGVQWLGAGLILASIIAV 301
               +   R+  PA A     +  V A L    + GE LS ++WL  G+I+ +++ V
Sbjct: 227 INAYMYLIRNVSPALATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLV 283