Pairwise Alignments

Query, 468 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (NCBI) from Rhodospirillum rubrum S1H

Subject, 386 a.a., D-alanyl-D-alanine carboxypeptidase from Pseudomonas putida KT2440

 Score =  150 bits (380), Expect = 5e-41
 Identities = 88/256 (34%), Positives = 143/256 (55%), Gaps = 5/256 (1%)

Query: 46  AGYASIVVDASTGRVLQARNADMRNYPASLTKMMTLYLLFEAIDNGKYTLESRLPVSKWA 105
           A  + +++DAS+G VL   N D R  PASLTK+MT Y+    I  G+      + VS+ A
Sbjct: 36  AAKSYVLMDASSGNVLVENNGDERLPPASLTKLMTAYIATLDIRRGQIGESDPVTVSENA 95

Query: 106 ANQAPSKLGVAAGTGIKVEHAIKALVTKSANDVAVVIAEALGGTEANFSALMTRKAAALG 165
                S++ +  G+ + V   +  ++ +S ND +V +AE + G+E  F+ +M + AA LG
Sbjct: 96  WRTGGSRMFIKVGSQVTVSDLLHGIIIQSGNDASVALAEHIAGSEDAFADMMNKTAADLG 155

Query: 166 MSQTTFRNASGLPNNGQMTTARDMAVLSMALIRHFPNHYRFFATQSFRFGNRTITTHNHV 225
           M+ + F N +GLP+    ++A DMA L+ A+I   P HY  ++ + F + N      N +
Sbjct: 156 MTNSHFMNPTGLPHPEHYSSAHDMATLARAIINVDPAHYAIYSQKEFFWNNIKQPNRNLL 215

Query: 226 VREYPGADGLKTGYIQASGFNVASSAVRNGRRLVAVVFGGQTARARDTQMMALLDEGF-- 283
           +      DGLKTG+   +G+ + +SAVR+G+RL+AVVFG  + ++R  +   LL  GF  
Sbjct: 216 LWRDKTVDGLKTGHTDEAGYCMVASAVRDGQRLIAVVFGTNSEQSRAAETQKLLTYGFRF 275

Query: 284 ---ATLAREGGSVVQA 296
               T  ++G  + QA
Sbjct: 276 FETQTFYQKGTELTQA 291