Pairwise Alignments

Query, 372 a.a., L-carnitine dehydratase/bile acid-inducible protein F (NCBI) from Rhodospirillum rubrum S1H

Subject, 393 a.a., carnitine dehydratase from Pseudomonas simiae WCS417

 Score =  216 bits (550), Expect = 9e-61
 Identities = 139/357 (38%), Positives = 196/357 (54%), Gaps = 12/357 (3%)

Query: 6   LKDMRVIDMGQYIPGPFACLLLSDLGAEVIKIEPPGG-DPMRLFGPLDPDGVSPLYKVLN 64
           L  ++V+D    +PGPFA L+L+D+GAEV++IE P   D +R+  P D  G S  +  LN
Sbjct: 5   LASLKVLDFSTLLPGPFASLMLADMGAEVLRIESPTRMDLLRVLPPHD-QGTSASHAYLN 63

Query: 65  RNKTVVTLDLKSAEGKAGLATLIGRSHGLVESFRPGVMERLGFGEAALDGLNRALVHVMV 124
           RNK  + LDLK AE    +  L+     L+E FRPGVM+RLG G  AL  +N  L++V +
Sbjct: 64  RNKRSLALDLKQAEALEIVRVLVNDYDILLEQFRPGVMDRLGLGYEALKAINPRLIYVAI 123

Query: 125 SGFGQTGPWRDRAGHDMTYLALSGALAMSGTADQPVAPF-PPLAD-HAGAMMAVVAMLAG 182
           +G+GQTGP++DRAGHD+ YLAL+G  + +G  D    P    LAD   G++ AVV +LA 
Sbjct: 124 TGYGQTGPYKDRAGHDINYLALAGVASYTGRQDAGPLPLGVQLADVGGGSLHAVVGLLAA 183

Query: 183 LLRRLRSGRGGHYDLSLYESARALNAM-GLALAARGAPTARGHDLLNGGAAYYKIYGTAD 241
           ++ R +SG G + D+S+ + + +LNAM G    A G        +LNGG ++Y  Y + D
Sbjct: 184 VIARQQSGVGQYLDVSMTDCSFSLNAMAGAGYLACGVEPEWESHVLNGG-SFYDYYRSRD 242

Query: 242 GGHLAVAPIEPKFWAAFCAALDRPDLVARQSEPLP--QTALIAELEALFATRDRQAWMAV 299
           G  ++V  +EP F    C AL RP+L A+   P P  Q AL   L+  F  R      A+
Sbjct: 243 GRWMSVGSLEPAFMQQLCTALGRPELAAQGLSPKPEQQKALKQALQVEFEKRSFDELCAL 302

Query: 300 LGPADCCVEPVCRPDEVLAGVLEAPRGMVHSGTDG----LIDLLLPILLAESGAAPR 352
               D CVEPV    E +A      R +V     G       L  P+  ++   APR
Sbjct: 303 FAATDACVEPVLTLSEAVAHPQLKARALVSQVPRGDGSTQSQLACPLKFSDGLPAPR 359