Pairwise Alignments

Query, 478 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

Subject, 480 a.a., Nitrogen regulation protein NR(I) from Pseudomonas putida KT2440

 Score =  277 bits (708), Expect = 6e-79
 Identities = 165/400 (41%), Positives = 230/400 (57%), Gaps = 20/400 (5%)

Query: 1   MHRILMVEDSPSNAELYATYLRASGMTVTLAGTGGQALDYLVADASAFDLVVLDLGLPDM 60
           M  IL+VED           L  +   V+ AG+  +A +      + FDL+V DL LP  
Sbjct: 1   MPHILIVEDETIIRSALRRLLERNQYQVSEAGSVQEAQERF--SIATFDLIVSDLRLPGA 58

Query: 61  DGLEILRKLGGPAAMPPTVVLTGSGSVRRAVEAMREGAIDFLVKPCGADKLRTAVEEALE 120
            G E++ KLG      P +++T   S+R AV++M+ GA+D++ KP   D++  AV   L 
Sbjct: 59  PGTELI-KLGQGT---PVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQAVARILR 114

Query: 121 RR------TPTAEGRAPAADPTRAKRGPS-------GFLGSSPAMSNVFSLIEAAAASST 167
            R       P AE RA     T + +G +       G +GS   M +++S I   A + +
Sbjct: 115 DRQNAPAAAPPAEPRASNGKATASDKGSAATANGEIGIIGSCQPMQDMYSKIRKVAPTDS 174

Query: 168 ASVFITGETGTGKELCANAIHNLSDRRNGPFVAINCGAIPRELMESEIFGHRKGAFTGAI 227
            +V I GE+GTGKEL A A+HNLS R   P +++NC AIP  L+ESE+FGH KGAFTGA 
Sbjct: 175 -NVLIQGESGTGKELVARALHNLSRRAKAPMISVNCAAIPETLIESELFGHEKGAFTGAS 233

Query: 228 NDREGAASRADGGTLFLDELCEMDLDLQVKLLRFIQTGTYRKVGDGADRQVNIRFVCATN 287
             R G    ADGGTLFLDE+ E+ L+ Q +LLR +Q G  R+VG    ++V++R + AT+
Sbjct: 234 AGRAGLVEAADGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATH 293

Query: 288 RDPLVEVKAGRFREDLYYRLYVVPIHLPPLSARGDDIILLARRFLADFSKLEGKRFQEFS 347
           RD     KAG+FREDLYYRL+V+ + LP L  RG D+  +A  FLA  S   G+    FS
Sbjct: 294 RDLKNLAKAGQFREDLYYRLHVIALKLPALRERGSDVNEIANVFLARQSARIGRDDLHFS 353

Query: 348 ADALGRIMAYRWPGNVRQLENVVRNIVVLNDGVTVEPTML 387
           A+A   I  Y WPGNVR+LEN V   V+L++   +   +L
Sbjct: 354 AEAEQAIRHYSWPGNVRELENAVERAVILSESAEISAELL 393