Pairwise Alignments

Query, 1037 a.a., Acriflavin resistance protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 1014 a.a., putative Multidrug efflux RND transporter from Pseudomonas putida KT2440

 Score =  638 bits (1646), Expect = 0.0
 Identities = 385/1010 (38%), Positives = 579/1010 (57%), Gaps = 9/1010 (0%)

Query: 1    MDVSSLFIRRPVFATVLSLLLVVMGIAAMTRLAVRELPDIDSAVVSVTTPYTGAAPEIVD 60
            M  +  FI+RPV A+V+SLL++++G  A  +L +R+ P +++A+++VTT Y GA  E + 
Sbjct: 1    MAFTDTFIQRPVLASVVSLLILLLGFQAWNKLQIRQYPQMENALITVTTAYPGANAETIQ 60

Query: 61   TDITEVIENAVAGVSGIRTITSQSRRGQGRTVIEFESGVSMDEAVNDVRDAVAKVRGDLP 120
              IT+ ++ ++A   GI  +TS SR+      I    G   D    ++     +VR  LP
Sbjct: 61   GYITQPLQQSLASAEGIDYMTSVSRQNFSIISIYARIGADSDRLFTELLAKANEVRNKLP 120

Query: 121  DDIEEPRIAKSDTDSDPVMRLSLTSPRMTPIELTDFADRYIVDRLATIDGVAQVDLYGER 180
             D E+P ++K   D+  +M +S  S  M+  ++TD+  R I  +LAT+ G+A+ ++ G +
Sbjct: 121  QDSEDPVLSKEAADASALMYVSFYSKEMSNPQITDYLSRVIQPKLATLPGMAEAEILGNQ 180

Query: 181  RQAIRLWLDRRAMAARQVTVQDVEAALRRANVELPAGEIESASRLLTVRAATLLTSPEAF 240
              A+RLWLD   +A   ++  DV  A+RR N    AGE++    + +V A+T L S EAF
Sbjct: 181  VFAMRLWLDPVKLAGFGLSATDVTNAVRRYNFLSAAGEVKGEYVVTSVNASTELKSAEAF 240

Query: 241  GSTVIKVVDGYPLRVRDVARVELGVENDDTTVRVEGRDALTMGVLRQSQANTVAISNRIR 300
             +  +K      + + DVARVE+G EN DT    +G  ++ +G+     AN + +   +R
Sbjct: 241  AALPLKTSGDSRVLLGDVARVEMGAENYDTVSSFDGTPSVYIGIKATPAANPLDVIKEVR 300

Query: 301  AEIDRLRPSLPEGMSLEVSSDDALFINRSIHEVILTLGLSGLIVIIVNFAFLGSIRATLV 360
              +  L   LP  +++ ++ D   FI  SI EVI TLG + LIVI+V F FLG++R+ L+
Sbjct: 301  RIMPELESQLPSALNVSIAYDATRFIQASIDEVIKTLGEAVLIVIVVVFLFLGALRSVLI 360

Query: 361  PTVTIPVAVIGTFIGILLLGFSINLLTLLALILSIGLVVDDAIVVLENIQRRIEAGEPKL 420
            P VTIP+++IG    + ++G+S+NLLTLLA++L+IGLVVDDAIVV+ENI R +E G+   
Sbjct: 361  PVVTIPLSMIGVLFFMQMMGYSLNLLTLLAMVLAIGLVVDDAIVVVENIHRHMEEGKSPF 420

Query: 421  VAAARGTRQVTFAVVATSLTLIAVFVPISFMEGTVGRLFTEFGFVLACAVAISMLVALTL 480
             AA  G R++   VV+ ++TL AV+ PI F+ G  G LF EF   LA AV IS +VALTL
Sbjct: 421  DAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVIISGIVALTL 480

Query: 481  CPPLAAGVLAEGKAEGRLAHALNYAFGTLSRGYQRALSAVLGLPMVVLTVALLCGGASFW 540
             P + A +L   +    LAH L+  F  L   YQR L A L    VVL  A++       
Sbjct: 481  SPMMCALLLRREQNPSGLAHRLDQLFERLKGRYQRLLHATLDSRPVVLVFAVIILCLIPV 540

Query: 541  LYQGLPKELVPVEDRGVVVVSLNGPQGANTRYTDTQIRAVEAAVQPVLDRGEAVGVLAQV 600
            L +    EL P ED+GV+ +  + PQ AN  Y    + A      P+           Q+
Sbjct: 541  LLKFTQNELAPNEDQGVIFMMSSSPQPANLDY----LNAYTDQFTPLFKAFPEYYSSFQI 596

Query: 601  GQWNRPHRGYVVIRLDDWENRGRTASALAESLRKDLGKLAGATATPVVPAGLGLRGSRTP 660
              +N    G     L  W  R RT   L   ++  L +++G          L   G   P
Sbjct: 597  NGFNGVQTGIGGFLLKPWNERERTQMELLPLVQAKLEEISGLQIFGFNLPSLPGTGEGLP 656

Query: 661  LQVVIG-GPDYAEVEVWANALLKRAEELPGLINPELDFEQNQPQLSVGIDRDRADDLGVG 719
             Q VI    DY  +   A  +  RA+E       ++D   ++P++ V IDR +A  +GV 
Sbjct: 657  FQFVINTAGDYPALLDVAQRIKTRAQESGKFAFLDIDLAFDKPEVVVDIDRAKAAQMGVS 716

Query: 720  VEAIGQTLQTMLASREVTRFVDRGREYQVVVQARPEDRRTPSDLSNTFVRAEKGGALVPL 779
            ++ +G TL T+L   E+ RF   GR Y+V+ Q     R  P  L+N +V+ ++ G L+PL
Sbjct: 717  MDTLGGTLATLLGEAEINRFTLEGRSYKVIAQVERPYRDNPGWLNNYYVKNDQ-GQLLPL 775

Query: 780  DALVILKETAGAPDLNRYARLPSITLQSALAPGYDMGQAIDDVMALASQTVPPEARLSLA 839
              L+ L + A    LN++ +L +  +Q    P   +G+A+  V  +A +  P       A
Sbjct: 776  STLITLTDRARPRQLNQFQQLNAAIIQG--VPMVSLGEALKTVQDIAREEAPEGFAFDYA 833

Query: 840  GQSKEFLETSGGVLFTFLMALVIVYLVLAAQFESFLHPLIIMLSVPLAVSGALLSLWATG 899
            G ++++++    +  TF +AL I++LVLAAQFESF  PL+I+++VPL++ GALL L+   
Sbjct: 834  GAARQYVQEGSALWVTFGLALAIIFLVLAAQFESFRDPLVILVTVPLSICGALLPLFLGV 893

Query: 900  NSINVYSQIGIVLLIGLTAKNGILIVEFANQLRDE-GRSVREAILEAASLRLRPILMTVI 958
            +S+N+Y+Q+G+V LIGL +K+GILIVEFANQLRDE G SVREAI EAA++RLRP+LMT  
Sbjct: 894  SSMNIYTQVGLVTLIGLISKHGILIVEFANQLRDERGLSVREAIEEAAAIRLRPVLMTTA 953

Query: 959  CTILGAVPLAWSSGAGAESREAIGIVVIGGLGLASLLTLFVTPVLYDLLA 1008
              + G VPL  +SGAGA SR  IG+V+  G+ + +L TLFV P +Y LLA
Sbjct: 954  AMVFGMVPLILASGAGAVSRFDIGMVIATGMSIGTLFTLFVLPCIYTLLA 1003



 Score = 73.9 bits (180), Expect = 5e-17
 Identities = 78/344 (22%), Positives = 156/344 (45%), Gaps = 22/344 (6%)

Query: 701  QPQLSVGIDRDRADDLGVGVEAIGQTLQTM------LASREVTRFVDRGREYQVVVQARP 754
            QP+L+       A+ LG  V A+   L  +      L++ +VT  V R        + + 
Sbjct: 162  QPKLATLPGMAEAEILGNQVFAMRLWLDPVKLAGFGLSATDVTNAVRRYNFLSAAGEVKG 221

Query: 755  EDRRTPSDLSNTFVRAEKGGALVPL----DALVILKETA----GAPD---LNRYARLPSI 803
            E   T  + S     AE   AL PL    D+ V+L + A    GA +   ++ +   PS+
Sbjct: 222  EYVVTSVNASTELKSAEAFAAL-PLKTSGDSRVLLGDVARVEMGAENYDTVSSFDGTPSV 280

Query: 804  TLQSALAPG---YDMGQAIDDVMALASQTVPPEARLSLAGQSKEFLETSGGVLFTFLMAL 860
             +     P     D+ + +  +M      +P    +S+A  +  F++ S   +   L   
Sbjct: 281  YIGIKATPAANPLDVIKEVRRIMPELESQLPSALNVSIAYDATRFIQASIDEVIKTLGEA 340

Query: 861  VIVYLVLAAQFESFLHPLII-MLSVPLAVSGALLSLWATGNSINVYSQIGIVLLIGLTAK 919
            V++ +V+   F   L  ++I ++++PL++ G L  +   G S+N+ + + +VL IGL   
Sbjct: 341  VLIVIVVVFLFLGALRSVLIPVVTIPLSMIGVLFFMQMMGYSLNLLTLLAMVLAIGLVVD 400

Query: 920  NGILIVEFANQLRDEGRSVREAILEAASLRLRPILMTVICTILGAVPLAWSSGAGAESRE 979
            + I++VE  ++  +EG+S  +A LE A     P++   I       P+ + +G      +
Sbjct: 401  DAIVVVENIHRHMEEGKSPFDAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFK 460

Query: 980  AIGIVVIGGLGLASLLTLFVTPVLYDLLAPFTRSAGAVGQALDR 1023
               + + G + ++ ++ L ++P++  LL    ++   +   LD+
Sbjct: 461  EFALTLAGAVIISGIVALTLSPMMCALLLRREQNPSGLAHRLDQ 504