Pairwise Alignments

Query, 561 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 436 a.a., chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  241 bits (615), Expect = 4e-68
 Identities = 132/267 (49%), Positives = 182/267 (68%)

Query: 292 DTQASSVINDVAEAAGAMQVTASQLTQAADSTAEQSTAVAAAAQEASTNVQTVAAAAEEL 351
           + Q   V+N VA AA  ++ ++  ++  +  T+ Q+  VAAAA++AS NVQ VA+A EE 
Sbjct: 167 NNQVKPVVNAVAAAATELEASSGAMSAQSTDTSHQAMTVAAAAEQASVNVQAVASAVEEF 226

Query: 352 TSSIGEISRQIAQASQVSQKAVDQAAHTTGIVGGLEQAAKRIGEVVAMINDIASQTNLLA 411
           ++SI EIS Q+ +A+ V+ +A   A+ T   V GL  AA+RIG +V++INDIA+QTNLLA
Sbjct: 227 SASIKEISTQVHRAAAVASEAAGVASRTDTTVHGLSDAAQRIGAIVSLINDIAAQTNLLA 286

Query: 412 LNATIEAARAGDAGKGFAVVAGEVKSLANQTARATDDITQQIGSVQTATGAAVEAINEIA 471
           LNATIEAARAGDAGKGFAVVA EVK+LANQTARAT+DIT Q+  +Q     A++AI EI 
Sbjct: 287 LNATIEAARAGDAGKGFAVVANEVKNLANQTARATEDITSQVAHIQEVAAEAIKAIQEIT 346

Query: 472 TTIGEINEISANIAAAMEQQGAATQEIARNVEQAATGTDQVTRNIHGVNRTVDDTGHSAQ 531
            T+ +I E S+ +A A+E+Q A T EIARNV +AATGT  V+  I  V  T  +   SA 
Sbjct: 347 RTVSQIEETSSAVAGAVEEQNAVTVEIARNVAEAATGTSSVSSAIITVQATAAEATESAG 406

Query: 532 EVLNAATRLRDESAAMQTLVTTFLDKV 558
           +V +AA+ L  +S  +   V  F+ ++
Sbjct: 407 QVADAASELSRQSENLSREVDGFIARI 433



 Score = 40.0 bits (92), Expect = 2e-07
 Identities = 54/256 (21%), Positives = 96/256 (37%), Gaps = 36/256 (14%)

Query: 167 TELSQTQAAKASANIDHTNKVARIGIIAALIAVLIIAAIAGALLRQTIAAPLLALRGTME 226
           TEL  +  A ++ + D +++   +   AA  A + + A+A A+  +  +A +  +   + 
Sbjct: 182 TELEASSGAMSAQSTDTSHQAMTVAA-AAEQASVNVQAVASAV--EEFSASIKEISTQVH 238

Query: 227 RLA-----------RDDTAVEIPGHERKDEVGAMARAVLVFKDGMIESE--RLRARENAE 273
           R A           R DT V    H   D    +   V +  D   ++    L A   A 
Sbjct: 239 RAAAVASEAAGVASRTDTTV----HGLSDAAQRIGAIVSLINDIAAQTNLLALNATIEAA 294

Query: 274 RIGKEER------------ANTLAVLTHDFDTQASSVINDVAEAAGAMQVTASQLTQAAD 321
           R G   +            AN  A  T D  +Q + +    AEA  A+Q    ++T+   
Sbjct: 295 RAGDAGKGFAVVANEVKNLANQTARATEDITSQVAHIQEVAAEAIKAIQ----EITRTVS 350

Query: 322 STAEQSTAVAAAAQEASTNVQTVAAAAEELTSSIGEISRQIAQASQVSQKAVDQAAHTTG 381
              E S+AVA A +E +     +A    E  +    +S  I      + +A + A     
Sbjct: 351 QIEETSSAVAGAVEEQNAVTVEIARNVAEAATGTSSVSSAIITVQATAAEATESAGQVAD 410

Query: 382 IVGGLEQAAKRIGEVV 397
               L + ++ +   V
Sbjct: 411 AASELSRQSENLSREV 426



 Score = 32.0 bits (71), Expect = 5e-05
 Identities = 31/136 (22%), Positives = 53/136 (38%), Gaps = 20/136 (14%)

Query: 436 KSLANQTARATDDITQQIGSVQTATGAAVEAINEIATTIGEINEISAN-------IAAAM 488
           ++L    AR  + I      V+    A   A  E+  + G ++  S +       +AAA 
Sbjct: 150 QALKRMEARDAEFIAFANNQVKPVVNAVAAAATELEASSGAMSAQSTDTSHQAMTVAAAA 209

Query: 489 EQQGAATQEIARNVEQAATGTDQVTRNIH----------GVNRTVDDTGH---SAQEVLN 535
           EQ     Q +A  VE+ +    +++  +H          GV    D T H    A + + 
Sbjct: 210 EQASVNVQAVASAVEEFSASIKEISTQVHRAAAVASEAAGVASRTDTTVHGLSDAAQRIG 269

Query: 536 AATRLRDESAAMQTLV 551
           A   L ++ AA   L+
Sbjct: 270 AIVSLINDIAAQTNLL 285