Pairwise Alignments

Query, 561 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 438 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  277 bits (708), Expect = 7e-79
 Identities = 152/290 (52%), Positives = 204/290 (70%)

Query: 271 NAERASQEQRAATLSLLTQDFDTKASSVINDVAEAAGTMQTTASQLTQATESTAEQSTAV 330
           +AER S+ +R          F+ +   ++  V+ A+G +QTTA  L+      A+Q+  V
Sbjct: 147 DAERVSEARRREDTQRFADSFEAQVMGLVQSVSGASGDLQTTARWLSSGAAEAADQAVTV 206

Query: 331 AAAAQEASTNVQTVAAAAEELTSSIGEISRQIAQASHVSQKAVDQAAHTTGIVGGLEQAA 390
           AAAA +A++NV+TVA+AAEEL++S+ EISRQ+A ++ +S  A ++AA T  +V GL  AA
Sbjct: 207 AAAAGQATSNVETVASAAEELSASVSEISRQMADSARISTAASEEAARTNAMVQGLATAA 266

Query: 391 KRIGEVVAMINDIASQTNLLALNATIEAARAGDAGKGFAVVAGEVKSLANQTARATDDIT 450
            +IGEVV +INDIASQTNLLALNATIEAARAG+AGKGFAVVAGEVK+LANQT RATD+I 
Sbjct: 267 NKIGEVVKLINDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKNLANQTGRATDEIG 326

Query: 451 QQIGSVQTATGAAVQAINEIATTIGEINEISANIAAAMEQQGAATQEIARNVEQAATGTD 510
            QI +VQ  T   V+AI  IA TI ++ E ++ IA+A+EQQGAAT+EIARNVEQAATGT 
Sbjct: 327 LQIAAVQEETRKTVEAIKGIAATIEQVRENASGIASAVEQQGAATREIARNVEQAATGTR 386

Query: 511 QVTRNIHGVNQTVDNTGQSAKDVLNAATRLRDESAAMQTLVTTFLDKVRA 560
           QV++NI  ++       + A  VL +A  L   S  ++  VT FL +VR+
Sbjct: 387 QVSQNIDSISNNATEAVKGAGQVLTSADGLATSSQNLRDAVTRFLAEVRS 436



 Score = 48.9 bits (115), Expect = 4e-10
 Identities = 50/224 (22%), Positives = 88/224 (39%), Gaps = 22/224 (9%)

Query: 259 SMIESQGLRARENAERASQEQR----AATLSLLTQDFDTKASSVINDVAEAA---GTMQT 311
           S +E+    A E +   S+  R    +A +S    +   + ++++  +A AA   G +  
Sbjct: 215 SNVETVASAAEELSASVSEISRQMADSARISTAASEEAARTNAMVQGLATAANKIGEVVK 274

Query: 312 TASQLTQATESTAEQSTAVAAAAQEASTNVQTVAAAAEELTSSIG----EISRQIAQASH 367
             + +   T   A  +T  AA A EA      VA   + L +  G    EI  QIA    
Sbjct: 275 LINDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKNLANQTGRATDEIGLQIAAVQE 334

Query: 368 VSQKAVDQAA-----------HTTGIVGGLEQAAKRIGEVVAMINDIASQTNLLALNATI 416
            ++K V+              + +GI   +EQ      E+   +   A+ T  ++ N   
Sbjct: 335 ETRKTVEAIKGIAATIEQVRENASGIASAVEQQGAATREIARNVEQAATGTRQVSQNIDS 394

Query: 417 EAARAGDAGKGFAVVAGEVKSLANQTARATDDITQQIGSVQTAT 460
            +  A +A KG   V      LA  +    D +T+ +  V++ T
Sbjct: 395 ISNNATEAVKGAGQVLTSADGLATSSQNLRDAVTRFLAEVRSTT 438



 Score = 41.2 bits (95), Expect = 8e-08
 Identities = 57/305 (18%), Positives = 114/305 (37%), Gaps = 32/305 (10%)

Query: 106 MSSAEEREAYKTFADNYAGFAAGLVRIADLSKAGRIDEARELTWGETRPFYLALVKSTDR 165
           +S A  RE  + FAD++     GLV+    +       AR L+ G               
Sbjct: 151 VSEARRREDTQRFADSFEAQVMGLVQSVSGASGDLQTTARWLSSG--------------- 195

Query: 166 LTELSQIQAAVAAANIDHTNRIARIGIIAALIAVLIVAAVAGALLRQTIAAPLLALRATM 225
             E +     VAAA    T+ +  +   A  +     +A    + RQ   +  ++  A+ 
Sbjct: 196 AAEAADQAVTVAAAAGQATSNVETVASAAEEL-----SASVSEISRQMADSARISTAAS- 249

Query: 226 ERLARDDTAVDIPGHNRKDEVGAMARAVLVFKDSMIESQGLRARENAERASQEQRAATLS 285
           E  AR +  V             +   V +  D   ++  L      E A   +     +
Sbjct: 250 EEAARTNAMV----QGLATAANKIGEVVKLINDIASQTNLLALNATIEAARAGEAGKGFA 305

Query: 286 LLTQDFDTKASSVINDVAEAAGTMQTTASQLTQATESTAEQSTAVAAAAQEASTNVQTVA 345
           ++  +      ++ N    A   +    + + + T  T E    +AA  ++   N   +A
Sbjct: 306 VVAGE----VKNLANQTGRATDEIGLQIAAVQEETRKTVEAIKGIAATIEQVRENASGIA 361

Query: 346 AAAEELTSSIGEISRQIAQASHVSQKAVDQAAHTTGIVGGLEQAAKRIGEVVAMINDIAS 405
           +A E+  ++  EI+R + QA+  +++    + +   I     +A K  G+V+   + +A+
Sbjct: 362 SAVEQQGAATREIARNVEQAATGTRQV---SQNIDSISNNATEAVKGAGQVLTSADGLAT 418

Query: 406 QTNLL 410
            +  L
Sbjct: 419 SSQNL 423