Pairwise Alignments

Query, 499 a.a., Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 630 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  163 bits (413), Expect = 1e-44
 Identities = 98/259 (37%), Positives = 150/259 (57%), Gaps = 5/259 (1%)

Query: 242 ALRRSRDGLEDIVEQRTADIDRARAEAVKASHSKSRFLAAAGHDLMQPLEGAMMYAGALG 301
           AL  S   L+  + + TA++ R   +   AS +K+R LAAA HDL QPL    +++  L 
Sbjct: 220 ALAESHRLLQSRINEATAELARKNQQLEVASQAKTRLLAAASHDLRQPLHALTLFSDGLA 279

Query: 302 RQAETDRAR-QAVAELKNAHQAMSRLIRSILEISKLDCGAVEPLPRVFALGPLLDQLVGE 360
              ETD  + Q +  ++    ++ RL   +L +S+LD G ++P    F L  L D++   
Sbjct: 280 -NGETDPLKLQRIGHIRECVDSLDRLFSELLNLSQLDAGVLQPQWADFPLDRLFDEISRN 338

Query: 361 VQPQAQAKGLRVRRVWTSARLETDPLLLERILRNLLANALRHTHKGGIVLGVRRRADGLD 420
            +P A+ +GLR+    T   +  D ++L RIL NL++N+LRHT +GG+++G RRR  G+ 
Sbjct: 339 FRPVAEQQGLRLVVRKTDVWVRCDYVMLSRILNNLVSNSLRHTIEGGVLIGARRRGKGVR 398

Query: 421 IAVADSGIGIAAQNLGRIFEAFIQID--GGQLDR-SEGLGLGLAIVDRLSRLLGLDVSVR 477
           I V D+G+GIA Q+  R+FE F Q++  G Q  R + G+GLGLA V RL+ LL   V + 
Sbjct: 399 IDVVDTGVGIAPQHQARVFEEFYQVEPTGRQAARGARGMGLGLATVQRLADLLNTRVELS 458

Query: 478 SRLGKGTVFSLHIPSGALA 496
           S+L KGT   + + S   A
Sbjct: 459 SKLHKGTCVRVLVRSAPAA 477