Pairwise Alignments

Query, 499 a.a., Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 632 a.a., putative hybrid sensor and regulator, histidine kinase from Pseudomonas putida KT2440

 Score =  178 bits (452), Expect = 4e-49
 Identities = 108/260 (41%), Positives = 159/260 (61%), Gaps = 3/260 (1%)

Query: 240 TAALRRSRDGLEDIVEQRTADIDR---ARAEAVKASHSKSRFLAAAGHDLMQPLEGAMMY 296
           TA L    D L   +E+R+    R   A+ EA +A+ SK++FLAA  HDL+QPL  A ++
Sbjct: 230 TAELTSLNDQLLREIEERSQAESRLREAKREAEQANLSKTKFLAAVSHDLLQPLNAARLF 289

Query: 297 AGALGRQAETDRARQAVAELKNAHQAMSRLIRSILEISKLDCGAVEPLPRVFALGPLLDQ 356
             AL  + E   A   V  + N+ + +  L+ ++++ISKLD G ++     FAL  L+D 
Sbjct: 290 TSALLERDEPQNAAHLVRNVSNSLEDVENLLGTLVDISKLDAGVIKADVAPFALHELMDN 349

Query: 357 LVGEVQPQAQAKGLRVRRVWTSARLETDPLLLERILRNLLANALRHTHKGGIVLGVRRRA 416
           L  E    A+++GL +  V  SA + +D  LL RILRNLL+NA+R+T  G +VLG RR  
Sbjct: 350 LAAEYVQVARSEGLELHFVGCSAVVRSDIQLLARILRNLLSNAIRYTPSGRVVLGCRRLR 409

Query: 417 DGLDIAVADSGIGIAAQNLGRIFEAFIQIDGGQLDRSEGLGLGLAIVDRLSRLLGLDVSV 476
            G+ I V DSGIGIA ++L  +F  F + D  + D+  GLGLGLAIV++++ +LG  + V
Sbjct: 410 GGVRIEVWDSGIGIAEEHLQDMFLEFKRGDVQRPDQDRGLGLGLAIVEKIAGILGHRIRV 469

Query: 477 RSRLGKGTVFSLHIPSGALA 496
           RS LGKG+VF++ +P    A
Sbjct: 470 RSWLGKGSVFAVEVPLSTTA 489