Pairwise Alignments

Query, 406 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 415 a.a., Polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  427 bits (1097), Expect = e-124
 Identities = 220/407 (54%), Positives = 289/407 (71%), Gaps = 3/407 (0%)

Query: 2   GAEMSLKSKLRRAERLRQLRAFGLILPLLLFLVVTFVVPIADMLRRSVHDPELSQVWPAT 61
           GA  SLK +L+ AER+ + +A  LI PL LFL++ F+VPIA +L +SV +PE+    P T
Sbjct: 10  GAGPSLKQRLKHAERVNRWKAQALIAPLALFLLLVFLVPIAALLYKSVGNPEVVGGLPRT 69

Query: 62  TSAIKGWTARERLPDEAVFAALAGDLRASRDAATLATAARRLNYDFNGSRTLLFTTARKL 121
              I  W  +  LP E V+ AL+ DL  SR   TL   ++RLN +  G R+LL  TAR L
Sbjct: 70  VEIISQWDGKS-LPGEDVYKALSQDLAESRKNQTLGDLSKRLNMELAGYRSLLTKTARAL 128

Query: 122 P--ASAPSWTEALIAADPRWGETEVWGAINRASGPLTAFFLMQAVDLERDATGALRGAPT 179
           P  A   S+ EAL A D RWG+   W AI R +  +T+F+L+ +VD   D  G L  A  
Sbjct: 129 PFKAEPASYKEALQAVDERWGDPAYWQAIRRNTSSVTSFYLLASVDHRIDDLGELAKATP 188

Query: 180 DEAIYIDVLGRTFGISLTVTVLCLLLGFPVAYLLANLPPRQANLLMILVLLPFWTSLLVR 239
           D+AIY+D+  RT  + + +T +CL+L +P+AYLLANLP RQ+NLLMILVLLPFWTS+LVR
Sbjct: 189 DQAIYLDIFVRTLWMGVVITTICLVLAYPLAYLLANLPTRQSNLLMILVLLPFWTSILVR 248

Query: 240 TAAWVVLLQDQGLVNNLLIWLGVIEKPLRLMYNRVGVIVAMTHVLLPFMILPLYSVMKGI 299
            AAW+VLLQ  GL+N+ L+ +G+I++PL L++NR GV ++M H+LLPFMILPLYSVMKGI
Sbjct: 249 VAAWIVLLQSGGLINSALMAMGIIDQPLELVFNRTGVYISMVHILLPFMILPLYSVMKGI 308

Query: 300 SPVYLRAARSLGATPTIAFLRVYLPQCLPGFGAGALLTFILALGYYITPALVGGAADQML 359
           SP Y+RAA SLG  P  +F RVY PQ   G GAG LL FILA+GYYITPAL+G   DQM+
Sbjct: 309 SPSYMRAAISLGCHPFASFWRVYFPQTYAGVGAGCLLVFILAIGYYITPALLGSPNDQMV 368

Query: 360 SYFIAFYTSDTVNWGMASALGAVLLAATLVLYAVYTRLVGTDSVKLS 406
           SYF+AFYT+ ++NWGMA+ALG +LL AT++LY +Y+ LVG   ++LS
Sbjct: 369 SYFVAFYTNTSINWGMATALGGLLLLATVLLYLIYSWLVGASRLRLS 415