Pairwise Alignments

Query, 823 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 382 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score =  150 bits (379), Expect = 1e-40
 Identities = 95/212 (44%), Positives = 122/212 (57%)

Query: 602 NMQTVAAATNELTASQGEIARTISLTANGATKAAESVTTAVDRVRGLEKAAADIGAVIAL 661
           N QTV+AA  EL+AS  EI + I+L       A  S   A   +  L  A   IG V  L
Sbjct: 55  NAQTVSAAAEELSASIREIGQQIALAGQVTGGAVASAEKAQGTITRLSAAVNRIGEVANL 114

Query: 662 ITDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKALANQTARATDTIRATVVDMQQW 721
           I DIASQTNLLALNATIEAARAGEAGKGFAVVA EVK LANQTA+AT+ I A + ++Q  
Sbjct: 115 IQDIASQTNLLALNATIEAARAGEAGKGFAVVANEVKNLANQTAKATEEISAQIGEVQAS 174

Query: 722 MGQAVDSITEVNDIVIGMREQASGAAAATEQQTSATSEITRNVEQASIASREVGLHIGSV 781
              AV S+ E+   +  +   +   A A  QQ +AT +I RN+ Q + A+REV   I  V
Sbjct: 175 TVDAVASVAEIAAAIKEVEGVSVSVAGAIRQQDAATQDIARNIAQTTSAAREVAERIAEV 234

Query: 782 ASEAMQALENTQGIKAAADDLSASARQLEKEV 813
           + EA    E    +   + D++ S   L+  +
Sbjct: 235 SEEAGITGERAARVNHISVDVARSIESLKSVI 266



 Score = 39.7 bits (91), Expect = 3e-07
 Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 16/180 (8%)

Query: 549 MADDFEGKVRSVASAVSDSAQKLSHDSEDMRRISEGVSQKSSNVAAASEEMGINMQTVAA 608
           +  D   +   +A   +  A +     +    ++  V   ++  A A+EE+   +  V A
Sbjct: 114 LIQDIASQTNLLALNATIEAARAGEAGKGFAVVANEVKNLANQTAKATEEISAQIGEVQA 173

Query: 609 ATNELTASQGEIARTISLTANGATKAAESVTTAV-DRVRGLEKAAADIGAVIALITDIAS 667
           +T +  AS  EIA         A K  E V+ +V   +R  + A  DI   IA  T  A 
Sbjct: 174 STVDAVASVAEIA--------AAIKEVEGVSVSVAGAIRQQDAATQDIARNIAQTTSAAR 225

Query: 668 QTNLLALNATIEAARAGEAGKGFAVVAGEVKALANQTARATDTIRATVVDMQQWMGQAVD 727
           +        + EA   GE        A  V  ++   AR+ +++++ +V + +   + VD
Sbjct: 226 EVAERIAEVSEEAGITGER-------AARVNHISVDVARSIESLKSVIVRVVRTATKEVD 278



 Score = 27.7 bits (60), Expect = 0.001
 Identities = 11/25 (44%), Positives = 19/25 (76%)

Query: 789 LENTQGIKAAADDLSASARQLEKEV 813
           L N Q + AAA++LSAS R++ +++
Sbjct: 53  LSNAQTVSAAAEELSASIREIGQQI 77