Pairwise Alignments

Query, 823 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 570 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  202 bits (514), Expect = 4e-56
 Identities = 119/274 (43%), Positives = 169/274 (61%)

Query: 548 RMADDFEGKVRSVASAVSDSAQKLSHDSEDMRRISEGVSQKSSNVAAASEEMGINMQTVA 607
           R+  DF   V +V + V++SA  L   ++ M  ++E  S++S+ VAAA+E+  +N++TVA
Sbjct: 295 RLTTDFNSSVFAVLNGVTESAHHLRDSAQSMTSVAEDTSRQSTVVAAAAEQASVNVETVA 354

Query: 608 AATNELTASQGEIARTISLTANGATKAAESVTTAVDRVRGLEKAAADIGAVIALITDIAS 667
           AA  +L AS+ EIAR ++ ++  + +A+E        V  L +A   IG V+ LI DIA+
Sbjct: 355 AAAEQLAASEHEIARQVANSSEISHRASEEAERVNSIVLSLSEATNRIGQVVTLINDIAA 414

Query: 668 QTNLLALNATIEAARAGEAGKGFAVVAGEVKALANQTARATDTIRATVVDMQQWMGQAVD 727
           QTNLLALNATIEAARAG+AGKGFAVVA EVK LA QTARAT+ I   +  +Q     AV 
Sbjct: 415 QTNLLALNATIEAARAGDAGKGFAVVANEVKHLATQTARATEDIVVQINSVQAVTRDAVS 474

Query: 728 SITEVNDIVIGMREQASGAAAATEQQTSATSEITRNVEQASIASREVGLHIGSVASEAMQ 787
           +I  +   +  + E AS  A+A E+QT+AT+EI RNV++AS  +REV   I  V   A  
Sbjct: 475 AIGGIGHTISSISESASAIASAVEEQTAATAEIARNVQEASSGTREVTSSITLVNQGAAT 534

Query: 788 ALENTQGIKAAADDLSASARQLEKEVDGFLSHLR 821
                  +   AD+LS  + QL  EV  FL+ ++
Sbjct: 535 TGSAAHQLLGTADELSQQSEQLATEVSEFLAAIK 568



 Score = 54.7 bits (130), Expect = 1e-11
 Identities = 80/396 (20%), Positives = 158/396 (39%), Gaps = 35/396 (8%)

Query: 357 TISTQLGVGVVVAILGIGLVW-LSAGGISRPLVRVAQAISQISGGKTDITIVGLTRKDEL 415
           T+   +GV V+V  L I + W ++   ++ PL R   A+  ++ G  D+ I    R+DE+
Sbjct: 196 TLQLMVGVTVLVGALSILVSWTIAKRNLATPLKRSILAMRDLADGNLDVAIRHTERRDEI 255

Query: 416 GTMARATDALRTSVDEAFKLK--QMVELQPTPTLLCHPADLTITYMNAAGRTLLDHVLKG 473
           G M RA +  + +     +L+  Q  E Q          +   T  N++   +L+ V + 
Sbjct: 256 GEMIRALEIFKENGQARHRLEAAQAAE-QAARNRRQEAIERLTTDFNSSVFAVLNGVTE- 313

Query: 474 RGLSAAQAMGHPANEFHPSPGEMRRRATTPSAMPFKERFTLDGVIIESNVTPIFDQGGAF 533
               +A  +   A        +  R++T  +A   +    ++ V   +      +     
Sbjct: 314 ----SAHHLRDSAQSMTSVAEDTSRQSTVVAAAAEQASVNVETVAAAAEQLAASEH---- 365

Query: 534 LGPMLNWTDVTRYVRMADDFEGKVRSVASAVSDSAQKLSHDSEDMRRISEGVSQKSSNVA 593
                   ++ R V  + +   +    A  V+     L   SE   RI + V+   +++A
Sbjct: 366 --------EIARQVANSSEISHRASEEAERVNSIVLSL---SEATNRIGQVVT-LINDIA 413

Query: 594 AASEEMGINMQTVAAATNELTASQGEIARTISLTANGATKAAESVTTAVDRVRGLEK-AA 652
           A +  + +N    AA   +       +A  +   A    +A E +   ++ V+ + + A 
Sbjct: 414 AQTNLLALNATIEAARAGDAGKGFAVVANEVKHLATQTARATEDIVVQINSVQAVTRDAV 473

Query: 653 ADIGAVIALITDIASQTNLLA------LNATIEAAR-AGEAGKGFAVVAGEVKALANQTA 705
           + IG +   I+ I+   + +A        AT E AR   EA  G   V   +  L NQ A
Sbjct: 474 SAIGGIGHTISSISESASAIASAVEEQTAATAEIARNVQEASSGTREVTSSI-TLVNQGA 532

Query: 706 RATDTIRATVVDMQQWMGQAVDSI-TEVNDIVIGMR 740
             T +    ++     + Q  + + TEV++ +  ++
Sbjct: 533 ATTGSAAHQLLGTADELSQQSEQLATEVSEFLAAIK 568