Pairwise Alignments

Query, 333 a.a., chaperone DnaJ (NCBI) from Rhodospirillum rubrum S1H

Subject, 375 a.a., Chaperone protein DnaJ from Pseudomonas putida KT2440

 Score =  147 bits (370), Expect = 5e-40
 Identities = 108/340 (31%), Positives = 158/340 (46%), Gaps = 58/340 (17%)

Query: 3   KDPYRILGVGKDATADDIRKAYRKLAKASHPDLHPGDPQAAATFRELAAAHDILGDSAKR 62
           +D Y +LGV + AT  D++KAYR+LA   HPD +PGD ++   F+E   A+++L D++KR
Sbjct: 4   RDYYEVLGVERGATEADLKKAYRRLAMKYHPDRNPGDKESEDKFKEANEAYEVLSDASKR 63

Query: 63  ARFDRGEIDASGAERAPERPSSAPGGPG-SGASSRYYYRD-----YADAGATGGYGTTAG 116
           A FD  +   +G +     PS   GG G  GA+    + D     +   G  GG G    
Sbjct: 64  AAFD--QYGHAGVD-----PSMGGGGAGFGGANFSDIFGDVFSDFFGGGGRGGGRGGAQR 116

Query: 117 FEDFEDLSDLFSAGLGRG---------------------RKGPRPGR------------D 143
             D     +L      RG                     +KG  P               
Sbjct: 117 GSDLRYTLELNLEEAVRGTTVSIRVPTLVNCQPCDGSGAKKGSTPSTCPTCGGIGQVRMQ 176

Query: 144 LRFHLTLDFLDAANGLRKRVTLP------DGPV-----LDLTIPPGTRDGEILRLKGKGA 192
             F          +G  K +T P      +G V     L + +P G   G+ +RL G+G 
Sbjct: 177 QGFFSVQQTCPRCHGQGKIITDPCTSCHGEGRVEEYKTLSVKVPAGVDTGDRIRLSGEGE 236

Query: 193 PGLNGGEAGDGLVEISVPPHPAFQRDGDDIVIEVPITLDEAVLGGKIEVPTISGKVAMTL 252
            G +GG  GD  V ISV  H  FQRDG  +  EVPI+  +A LGG++EVPT+ G+V + +
Sbjct: 237 AGTHGGPTGDLYVVISVREHEIFQRDGKHLYCEVPISYTDAALGGELEVPTLDGRVKLKI 296

Query: 253 PPGTTSGDVLRLRGKGIHPANRPAGDQRVILKIALPPAID 292
           P GT +G   RLRGKG+ P  R  G   ++ ++A+   ++
Sbjct: 297 PEGTQTGKQFRLRGKGVAPV-RGGGAGDLLCRVAVETPVN 335



 Score = 48.9 bits (115), Expect = 2e-10
 Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 5/108 (4%)

Query: 139 RPGRDLRFHLTLDFLDAANGLRKRVTLPDGPVLDLTIPPGTRDGEILRLKGKGAPGLNGG 198
           R G+ L   + + + DAA G    V   DG V  L IP GT+ G+  RL+GKG   + GG
Sbjct: 261 RDGKHLYCEVPISYTDAALGGELEVPTLDGRV-KLKIPEGTQTGKQFRLRGKGVAPVRGG 319

Query: 199 EAGDGLVEISVPPHPAFQRDGDDIVIEVPITLDEAVLGGKIEVPTISG 246
            AGD L  ++V       R   +++ E    L +++ G     P  SG
Sbjct: 320 GAGDLLCRVAVETPVNLSRRQRELLEE----LRDSLEGDSSHSPKASG 363