Pairwise Alignments

Query, 326 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 327 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  310 bits (795), Expect = 2e-89
 Identities = 153/311 (49%), Positives = 217/311 (69%)

Query: 14  SIPSLLIILVGVFLLLQLAPGDTVDALLAQMGGGDAQIIETLRHFYGLDAPVAVQLGRYL 73
           ++P+++ +++  F+L+QL PGD  D + A+ G   A+ +  LR  +GLD PV  QL  YL
Sbjct: 17  AVPTVIGVILLNFILMQLIPGDAADVVAAESGSATAESMAQLRTHFGLDLPVIQQLFAYL 76

Query: 74  LRLVQFDLGYSAIYGKPVIDVIVERLPVTLLLMGASLVVAVSGGVALGVLAARRVNKWPD 133
             L  F LG S  Y  PV+ +I  RL  TLLLM  +L  A++ G+A G + A RV +W D
Sbjct: 77  NNLAHFSLGISPRYNMPVVSLIGARLGNTLLLMVTALAFALAIGIAAGTVMATRVGRWQD 136

Query: 134 TLISTLGLVFYATPSFWLGLMAVVVFAVKLGWLPPGGFEEVGAGYQGLTRALDIARHMAL 193
             +S L L+ Y+TP FWLGLMA+V+F+V LGWLP GG E +GAGY G T  +D+ARH+ L
Sbjct: 137 RTLSVLALLLYSTPGFWLGLMAIVLFSVHLGWLPTGGSESIGAGYTGWTHVVDVARHLVL 196

Query: 194 PTITLSLIFLATYLRIMRASMLEVSSLDFVRTARAKGVDETKIVTHHVLRNALLPMLTLI 253
           P + ++  ++A + R+ RA+MLEVS  DFVRTA AKG+    +   H+LRNAL+P+ T+ 
Sbjct: 197 PALAMAGFYIAIFSRLTRAAMLEVSRQDFVRTAEAKGLHPWTVNLRHILRNALIPVTTVA 256

Query: 254 GLNASTMLGGSVVVESVFTLPGLGRLAYESVVQRDLNTLLGIVLLSAVLVIVVNFIVDLL 313
           G++  T+LGG+VVVE+VF+ PGLGRLA++SV  RD   LLG++L+S++LVIV N +VDLL
Sbjct: 257 GMHFGTLLGGAVVVETVFSWPGLGRLAFDSVAGRDYTVLLGVLLMSSLLVIVANMLVDLL 316

Query: 314 YARLDPRIRAK 324
           +A LDPRI+ +
Sbjct: 317 HAWLDPRIQVR 327