Pairwise Alignments

Query, 341 a.a., Transcriptional Regulator, LacI family (NCBI) from Rhodospirillum rubrum S1H

Subject, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

 Score =  156 bits (394), Expect = 8e-43
 Identities = 112/340 (32%), Positives = 178/340 (52%), Gaps = 22/340 (6%)

Query: 12  SIKDVARHAGVSPSTVSRALGRG-PISEPLRQQVEAAVRETGYRPNLSARRLRSRESGTV 70
           +IKDVA  AG+S +TVS  L +  P+SE +R +VEAA+ E  Y P+  AR L++R + T+
Sbjct: 3   TIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTATI 62

Query: 71  GLILADIGNPFFTALTRAVEDAAYQAGLRVILCNTGEDAEREAMYLRLMQEERVSGVIFA 130
           GL++ +  NP+F  L R +EDA  + G  VILCN+ ++ +++  YLR++ E+R+ G++ A
Sbjct: 63  GLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLVVA 122

Query: 131 PTLAYLDHPPQS--PLDFPVVLVDRAGPQGLYDSVVLDNEAACATLVDHFHARGYRRING 188
            ++   D   QS   +  P+V+VDR       D V +D+E        H    G+R +  
Sbjct: 123 -SVGQDDDLLQSLASVRTPMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRDV-A 180

Query: 189 LFGKTSATGVERRR--GYDDTMRAYGLEPKACAI--------APHAEAAEVAVSRWLSEP 238
             G  + TGV + R  G+   M   G       +          HA AA+V       E 
Sbjct: 181 YIGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVL------EG 234

Query: 239 EPPEAIVASNSLLLIGALRAVRRAWLRLPDDIALAGFDNELWTELVEPGMTVIEQPIEAI 298
           + P AI A N ++  G LRA     + +P ++++ GFD+   +  V P +T + Q I  +
Sbjct: 235 KRPSAIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIREL 294

Query: 299 GRAAMSLLRDRMADPTL-PPRQIVLKGRAIIRGSSAPALD 337
           G +A SLL  R+A P      Q ++  R ++R S+ P  D
Sbjct: 295 GESAASLLLTRIATPRQGAAEQRIVAPRIVLRESTGPRPD 334