Pairwise Alignments

Query, 599 a.a., ErfK/YbiS/YcfS/YnhG (NCBI) from Rhodospirillum rubrum S1H

Subject, 562 a.a., L,D-transpeptidase from Dickeya dianthicola ME23

 Score =  196 bits (499), Expect = 2e-54
 Identities = 126/374 (33%), Positives = 196/374 (52%), Gaps = 16/374 (4%)

Query: 217 FLATLAPPTPQYDLLRQGLVRYQALARDGGWPT-DLADGASIKPGDRDPRLPEMRRRLAA 275
           F+A+LAP   QY  +   L     L  +  WP   LAD  S++PGD    LP ++  L  
Sbjct: 181 FIASLAPRHSQYAKMHDALKNM--LTDNRPWPKLILAD--SLRPGDESNALPVLKEILLR 236

Query: 276 EGLVV---GSDPTF----IGPPDAELLDDFLVEAVRIFQAAHGLSADGVIGRGTLVDMNT 328
            G++    G+ P F     G       +  +VEAV+ FQ + GL  DGVIG+ T   +N 
Sbjct: 237 TGMLNQDGGAMPLFNEASSGNASPMRYEGDVVEAVKRFQHSQGLQDDGVIGKRTRDWLNV 296

Query: 329 TPAQRITQIRVALERWRLLPRALGQTHLLVNVPQYQLYLNEGRTTVLSMRVAVGRQDFET 388
           +   R T + + ++R RL+P  +  + ++VN+P Y L   +    +LS +V VG+   +T
Sbjct: 297 SSQMRATLLALNIQRLRLVPDKVS-SGIVVNIPNYSLSYYQNGAEILSSKVIVGQPKRKT 355

Query: 389 PLFSDTLRYMEFNPYWNVPISIAQAEVIPKQIENSAYLAKKGFTVLPRGVEGWDDGVGHE 448
           PL + +L  +  NP WNVP ++ + ++IPK I++  YL + G+TVL    E     +   
Sbjct: 356 PLMNSSLSNVVMNPPWNVPTTLTRQDIIPKVIQDPGYLQRHGYTVLSDWTES-AQPIDPS 414

Query: 449 SVDWKADAARS--YRLRQDPGPANPLGTVKFMFPNEYAVYLHDTNSRGVFDRSARAVSHG 506
            +DW   +A +  YRLRQ PG  N LG  KF  PN  A+YLHDT +  +F +  RA+S G
Sbjct: 415 MIDWPMVSASNFPYRLRQAPGDRNSLGRYKFNIPNTDAIYLHDTPNHNLFQKDIRALSSG 474

Query: 507 CVRVQEPALLANYILERFTDRIGKTAADFSGPTPKVVRLNRPLPIHLVYITAWGGEGGKV 566
           CVRV + + LA  +L+       + ++         V + + +P++  Y+TAW  + GK 
Sbjct: 475 CVRVNKASELAGLLLQDAGWNNARISSTLEQGNTTYVAVRQRVPVNFYYLTAWVSDDGKP 534

Query: 567 AFVRDIYAKDRAIR 580
            F  DIY  D  ++
Sbjct: 535 QFRTDIYNYDDTVK 548