Pairwise Alignments

Query, 262 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 322 a.a., dipeptide ABC transporter, binding subunit from Pseudomonas putida KT2440

 Score =  186 bits (472), Expect = 5e-52
 Identities = 104/236 (44%), Positives = 157/236 (66%), Gaps = 7/236 (2%)

Query: 19  GKRVVRAVRAVSFRVEAGESFGLVGESGSGKSTVLRAVAGLFDHWTGDI-VVNNQAQGAK 77
           G  +VRA+  VSF +EAG++  +VGESG GKST+ RA+  + +  +G + +   + +GA 
Sbjct: 23  GHALVRALNGVSFELEAGKTLAVVGESGCGKSTLARALTLIEEPSSGSLQIAGTEVKGAS 82

Query: 78  RDGA--FYRLVQMVFQDPYGSLHPKHTIDRILSEPLAVHR-LDQPERR--IREVLDQVQL 132
           +       R VQMVFQ PY SL+P+  I   L+EPL ++  L + ERR  ++++++QV L
Sbjct: 83  KAERKQLRRDVQMVFQSPYASLNPRQKIGDQLAEPLLINTSLSKAERRDKVQKMMEQVGL 142

Query: 133 GASYRFRYPHQLSGGQRQRVAIARALILSPRILLLDEPTSALDVSIQAEILNLLADIGRE 192
              +  RYPH  SGGQRQR+A+ARA++L P++L+ DEPTSALDVSIQA++LNL  D+ +E
Sbjct: 143 RPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEPTSALDVSIQAQVLNLFMDLQKE 202

Query: 193 RAMTLLLVSHDLGVVAHMCDRLAVMRNGEVVELASRDDLRAGRLDHPYSRQLLLAS 248
                + +SH+L VV H+ D++ VM  G   E+  ++D+ A  L HPY++ LL A+
Sbjct: 203 FNTAYVFISHNLAVVRHVADQVLVMYLGRPAEMGPKEDIYAKPL-HPYTQALLSAT 257