Pairwise Alignments

Query, 276 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 327 a.a., dipeptide transporter (NCBI) from Escherichia coli BW25113

 Score =  204 bits (520), Expect = 2e-57
 Identities = 114/268 (42%), Positives = 175/268 (65%), Gaps = 6/268 (2%)

Query: 6   LIDVDGLNVSFSSDKGTVHAVRDVSFTLGR-EKLAIVGESGSGKSQTGRAILGLT--PGK 62
           L++VD L+V F  +     AV  +S+++ + E + IVGESGSGKS +  AI+GL   PG+
Sbjct: 3   LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGR 62

Query: 63  VSARRMSFHDIDLRDLSARGWRSIRGKRIGMVMQDPKYSLNPVMTIGEQLMEAARPL--A 120
           V A ++ F+  DL+ +S +  R++ G  + M+ QDP  SLNP  T+G Q+MEA +     
Sbjct: 63  VMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGG 122

Query: 121 DLKSARLRSMEMLEAVRIRDPERVFRAWPHELSGGMGQRAMIAMMLLPEPEVLIADEPTS 180
           +  + R R++++L  V I DP      +PH+LSGGM QR MIAM +   P++LIADEPT+
Sbjct: 123 NKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTT 182

Query: 181 ALDVTVRLQVLAILDDLVRKRDMGLIFISHDLNLVRTFSDRVLIMVGGRIVETLAASALE 240
           ALDVT++ Q++ +L +L +K +M L+ I+HDL LV   + ++++M  G++VET  A A+ 
Sbjct: 183 ALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHAIF 242

Query: 241 EA-RHPYTRGLLACVPDPDHPRERLATL 267
            A RHPYT+ LL  +P+    +ERLA+L
Sbjct: 243 HAPRHPYTQALLRALPEFAQDKERLASL 270