Pairwise Alignments

Query, 276 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 278 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  322 bits (825), Expect = 6e-93
 Identities = 171/273 (62%), Positives = 208/273 (76%), Gaps = 4/273 (1%)

Query: 5   PLIDVDGLNVSFSSDKGTVHAVRDVSFTLGREKLAIVGESGSGKSQTGRAILGLTP--GK 62
           PL+ V+ L VSF +  G V AVR VSFTLGRE+L IVGESGSGKSQTGRAI+GLTP   +
Sbjct: 4   PLLTVENLRVSFPTRTGLVEAVRGVSFTLGRERLGIVGESGSGKSQTGRAIMGLTPKSAR 63

Query: 63  VSARRMSFHDIDLRDLSARGWRSIRGKRIGMVMQDPKYSLNPVMTIGEQLMEAARPLADL 122
           + A  + F DIDL   SA+  R +RGKR+ M++QDPKYSLNPVMTIG Q+ME  R    +
Sbjct: 64  IEADTLRFGDIDLLKASAKERRIMRGKRMAMILQDPKYSLNPVMTIGRQIMETLRTHEKI 123

Query: 123 KS--ARLRSMEMLEAVRIRDPERVFRAWPHELSGGMGQRAMIAMMLLPEPEVLIADEPTS 180
            S  AR R++ MLEAV+IRDPERVF  +PHE+SGGMGQR MIAMML+  PE+LIADEPTS
Sbjct: 124 GSGEARQRTLAMLEAVQIRDPERVFDLYPHEVSGGMGQRVMIAMMLVCGPELLIADEPTS 183

Query: 181 ALDVTVRLQVLAILDDLVRKRDMGLIFISHDLNLVRTFSDRVLIMVGGRIVETLAASALE 240
           ALDVTV+L+VL ILD LVR R MGLIF+SHDL LV +F DRVL+M  G++VE L+++ L+
Sbjct: 184 ALDVTVQLEVLDILDKLVRDRGMGLIFVSHDLRLVSSFCDRVLVMYAGKVVEELSSANLK 243

Query: 241 EARHPYTRGLLACVPDPDHPRERLATLVRDPAW 273
           EA+HPYT+GLL C+P+    R  L  L R P W
Sbjct: 244 EAKHPYTQGLLNCLPEIGGHRHPLPVLERKPEW 276