Pairwise Alignments

Query, 276 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 332 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  209 bits (531), Expect = 8e-59
 Identities = 125/265 (47%), Positives = 167/265 (63%), Gaps = 12/265 (4%)

Query: 6   LIDVDGLNVSFSSDKGTVHAVRDVSFTLGR-EKLAIVGESGSGKSQTGRAILGLTPGKV- 63
           LI+V  L+VSF    G+   V+ VSF +   E LAIVGESGSGKS T   ++GL P    
Sbjct: 4   LIEVHDLSVSF----GSAQPVKGVSFDVSPGEMLAIVGESGSGKSLTALGLIGLLPSHAK 59

Query: 64  SARRMSFHDIDLRDLSARGWRSIRGKRIGMVMQDPKYSLNPVMTIGEQLMEAAR--PLAD 121
           +  R+     DL  LS R WR IRG+ IGM+ Q+P  SLNPV+T+GEQ++E  R     D
Sbjct: 60  TGGRVQLEGRDLLPLSERQWRGIRGRDIGMIFQEPMTSLNPVLTVGEQIIEVLRIHEKID 119

Query: 122 LKSARLRSMEMLEAVRIRDPERVFRAWPHELSGGMGQRAMIAMMLLPEPEVLIADEPTSA 181
            + AR R++E+L+ V I D  R    +PH+LSGGM QR MIA+ +   P++LIADE T+A
Sbjct: 120 RRQARKRAIELLDLVNIPDAARRVDDYPHQLSGGMRQRVMIAIGVACNPKLLIADEATTA 179

Query: 182 LDVTVRLQVLAILDDLVRKRDMGLIFISHDLNLVRTFSDRVLIMVGGRIVET-LAASALE 240
           LDVT++ Q+L +LD+L R  +M +I I+HDL +V  ++DRV++M  GR VE  L      
Sbjct: 180 LDVTIQAQILQLLDNLRRDLNMAVILITHDLGIVAQWADRVMVMYAGRKVEEGLPEPVFS 239

Query: 241 EARHPYTRGLLACVP---DPDHPRE 262
              HPYTRGLLA  P   D  H R+
Sbjct: 240 NPYHPYTRGLLAASPRAEDGQHYRD 264