Pairwise Alignments

Query, 310 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 298 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  365 bits (937), Expect = e-106
 Identities = 174/290 (60%), Positives = 218/290 (75%)

Query: 19  WLLSDSPASRLQARLGRFYSGWLVFIRNPLAVIGLAIFLCLVILATFAPWIAPHDPLFGT 78
           W LS++PAS  QAR GR+Y   L  +R+P  V GL I   +V+ A FAPW+AP DP    
Sbjct: 7   WWLSEAPASAFQARCGRWYRMGLRTVRSPAMVFGLVILAAMVLAALFAPWLAPFDPNAQN 66

Query: 79  LSERLLPPSAGHWLGTDQQGRDIWSRIVFGSRTTLMIIFLVAITAAPVGLLIGTTAGFVG 138
           + +RLLPP A HWLGTDQ GRD+ SR+++G+R TL+I+ LVA+ +AP+GLL+G  AG+ G
Sbjct: 67  VQQRLLPPGAAHWLGTDQLGRDLLSRVIYGTRPTLLIVSLVALLSAPLGLLLGMCAGYFG 126

Query: 139 GIVEAALMRLTDAFLAFPKLILALAFAAALGAGLENAVLAIALTAWPPYARIARAETLAV 198
           G ++  LMR+TD F+AFP+L+LALA  A LG G+ NAV+AIA+TAWP YARIAR ET  V
Sbjct: 127 GWIDTLLMRVTDIFMAFPRLVLALALVAVLGPGIVNAVIAIAITAWPAYARIARTETRTV 186

Query: 199 RRTDFVAAARMCGSSPLRILIGQIMPMCIPSLVVRVSLDMAGVILIAAGLGFLGLGVAPP 258
           R +DF+ AAR+ G  P RIL G ++P+C+PS VVRV+LDMAG+IL AAGLGFLGLG  PP
Sbjct: 187 RGSDFIQAARVQGLRPARILFGHLLPICLPSTVVRVTLDMAGIILTAAGLGFLGLGAQPP 246

Query: 259 QPEWGAMVSEGRSQILAQWWVCTYPGIAICIVSLGFNLLGDGLRDVLDPK 308
             EWGAM+S GR  I  QWWV   PG+AI + SL FNL+GDGLRDVLDPK
Sbjct: 247 MSEWGAMISTGRQYIFDQWWVAAVPGVAILLGSLAFNLVGDGLRDVLDPK 296