Pairwise Alignments

Query, 310 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 304 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  247 bits (630), Expect = 3e-70
 Identities = 128/275 (46%), Positives = 173/275 (62%), Gaps = 6/275 (2%)

Query: 40  WLVFIRNPLAVIGLAIFLCLVILATFAPWIAPHDPLFGTLSERLLPP------SAGHWLG 93
           W  F +N  AVIGLA+F+ LV++A FA  IAPHDP        L+PP       A   LG
Sbjct: 26  WFYFRQNRGAVIGLAVFILLVLIAVFAAVIAPHDPTQQYRDALLVPPVWQDGGRAAFLLG 85

Query: 94  TDQQGRDIWSRIVFGSRTTLMIIFLVAITAAPVGLLIGTTAGFVGGIVEAALMRLTDAFL 153
           TD  GRD+ SR+++G++ +L I  +V   A   G++IG  AGF GG V+  +MR+ D  L
Sbjct: 86  TDAVGRDMLSRLIYGAQYSLFIGVVVVSIALVGGIVIGLVAGFFGGWVDTVIMRVMDVIL 145

Query: 154 AFPKLILALAFAAALGAGLENAVLAIALTAWPPYARIARAETLAVRRTDFVAAARMCGSS 213
           AFP L+LAL   A LG GL NA++AIA+   P +AR+ RA  ++  R ++V AAR+ G+ 
Sbjct: 146 AFPSLLLALVLVAILGPGLTNAMIAIAIVYQPHFARLTRAAVMSELRREYVTAARVAGAG 205

Query: 214 PLRILIGQIMPMCIPSLVVRVSLDMAGVILIAAGLGFLGLGVAPPQPEWGAMVSEGRSQI 273
            LR++   I+P C+  L+V+ +L  +  +L AA LGFLG+G  PP  EWG M++E R  I
Sbjct: 206 NLRLMFKTILPNCLAPLIVQATLSFSSAVLDAAALGFLGMGAQPPASEWGTMLAEAREFI 265

Query: 274 LAQWWVCTYPGIAICIVSLGFNLLGDGLRDVLDPK 308
           L  WWV T PG+ I I  L  NL+GDGLRD LDPK
Sbjct: 266 LRAWWVVTLPGLTILISVLAINLMGDGLRDALDPK 300