Pairwise Alignments

Query, 310 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 293 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  238 bits (606), Expect = 2e-67
 Identities = 120/273 (43%), Positives = 170/273 (62%), Gaps = 3/273 (1%)

Query: 37  YSGWLVFIRNPLAVIGLAIFLCLVILATFAPWIAPHDPLFGTLSE---RLLPPSAGHWLG 93
           Y  W  F RNP AVIG  I L +++LA FAPW+ P+    G + +   R +PP   HW G
Sbjct: 18  YMMWYRFSRNPAAVIGSLILLSVLVLAVFAPWLTPYPKHIGAVVDFRARHMPPDLEHWFG 77

Query: 94  TDQQGRDIWSRIVFGSRTTLMIIFLVAITAAPVGLLIGTTAGFVGGIVEAALMRLTDAFL 153
           TD+ GRDI+SR +FG R +L+++  V   + PVG ++G  AG+ GG  E  +  LT+  L
Sbjct: 78  TDKAGRDIFSRTIFGLRVSLLLVIGVLGISVPVGTVLGLVAGYFGGWTEKLISGLTNVML 137

Query: 154 AFPKLILALAFAAALGAGLENAVLAIALTAWPPYARIARAETLAVRRTDFVAAARMCGSS 213
           A P L++ALA +  L   L NA++AI L  W  +AR+  + + ++   D++ AAR+ G+ 
Sbjct: 138 AMPPLVMALAVSNLLEPTLTNAMIAITLLWWTWHARLIYSVSKSIASEDYIEAARLAGAG 197

Query: 214 PLRILIGQIMPMCIPSLVVRVSLDMAGVILIAAGLGFLGLGVAPPQPEWGAMVSEGRSQI 273
           PL IL  +I+P C+  + V+ +LD A VIL  A L FLG GV PP P+ G+MV++GR  +
Sbjct: 198 PLHILFREILPNCVSVISVKTTLDAAFVILFGATLSFLGFGVKPPTPDLGSMVADGRQFM 257

Query: 274 LAQWWVCTYPGIAICIVSLGFNLLGDGLRDVLD 306
              WW    PG A+  V+LGFNLLGDGLRD+ D
Sbjct: 258 PDFWWEVLCPGAAVLYVTLGFNLLGDGLRDMFD 290