Pairwise Alignments

Query, 333 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 340 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  367 bits (942), Expect = e-106
 Identities = 183/331 (55%), Positives = 245/331 (74%)

Query: 3   AVLRTLLATATTLFGLLFVTFLISRMLPADPVLAVVGDHASQALVDRTRIELGLDKPLLV 62
           A+LR+ L+ A  L  LL VTFLI +  P DPVL VVGD AS       R  +GLD+P+  
Sbjct: 9   ALLRSGLSFALMLLVLLLVTFLIGKAAPIDPVLQVVGDRASPEAYQEARQRMGLDQPIAT 68

Query: 63  QFGLYIGNVLQGDLGQSVRTGEPIASELARVFPATLELATLGTLIGVLAGVPLGILAALR 122
           QF  Y+ +  +GDLG+S  TG  +  +L + FPATLELATLG L+GV+ GVPLG+LAA +
Sbjct: 69  QFVRYVADAAKGDLGRSTTTGRAVLEDLRQYFPATLELATLGILLGVVFGVPLGMLAAHQ 128

Query: 123 KDTLIDHLVRFIGLMGYSFPIFWLGLMGLLVFYATLGVLPGPGRLDFGYEDFVTPITGLM 182
            +  ID L+R +GL+GYS P+FWLGL+GLL+FYA LG + GPGRLD  Y+  V   + L+
Sbjct: 129 HNRWIDQLLRLVGLLGYSVPVFWLGLVGLLIFYARLGWVGGPGRLDDIYQYTVDSWSNLV 188

Query: 183 TIDTLLAGDMDLFRNALAHLILPAGLLGYYSLAYISRMTRSLMLGELRQEYIITARVKGV 242
            +DTL AG+ + FRN L+HL+LPA LLGY+SLAYISRMTR+  L EL +EY++TARVKG 
Sbjct: 189 LVDTLRAGNGEAFRNGLSHLVLPAALLGYFSLAYISRMTRAFFLEELGKEYVLTARVKGA 248

Query: 243 SETKIVWKHALGNIKVPLITVVALSYAGLLEGSVLTETVFSWRGLGLYITDSIFGQDMPA 302
           SE +++ +H L N+  PL+TV+ALSYA LLEG+VLTETVFSW G+GLY+T+++F  D+ A
Sbjct: 249 SELQVLVRHVLPNVAAPLVTVIALSYAVLLEGAVLTETVFSWPGIGLYVTNALFSADVAA 308

Query: 303 VMGGTIVVGVIFIVINMLTDVAYRFLDPRSR 333
           V+GGT++VG+ F+V+N  +DV    +DPR+R
Sbjct: 309 VLGGTLLVGLCFVVLNTASDVLGYLMDPRAR 339