Pairwise Alignments

Query, 333 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 342 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  207 bits (528), Expect = 2e-58
 Identities = 119/331 (35%), Positives = 184/331 (55%), Gaps = 1/331 (0%)

Query: 3   AVLRTLLATATTLFGLLFVTFLISRMLPADPVLAVVGDHASQALVDRTRIELGLDKPLLV 62
           A+L  L A    +  L  + F ++R++P DP    +G  A+Q  VD  R E+GLDKPL V
Sbjct: 8   AILNRLGAFVLVMIALSIMIFALARVVPGDPARMALGPAATQEQVDALRGEMGLDKPLAV 67

Query: 63  QFGLYIGNVLQGDLGQSVRTGEPIASELARVFPATLELATLGTLIGVLAGVPLGILAALR 122
           Q+  YIGN L GDLG S+ +  P+ ++LA+  PAT+EL  +  +      +PLG++ A  
Sbjct: 68  QYLDYIGNALHGDLGFSLVSQRPVTTDLAQTVPATVELVLVSVIFMFAVAIPLGVITAHY 127

Query: 123 KDTLIDHLVRFIGLMGYSFPIFWLGLMGLLVFYATLGVLPGPGRLDFGYEDFVTPITGLM 182
           +D  +DH+ R + L G + P F   +   L+    L   P  GRLD G      P TG +
Sbjct: 128 RDRPLDHIGRILSLTGVTIPSFLFAITLQLLAARFLSGWPIIGRLDHGLGWQGGP-TGFI 186

Query: 183 TIDTLLAGDMDLFRNALAHLILPAGLLGYYSLAYISRMTRSLMLGELRQEYIITARVKGV 242
            ID  LAG  D+  +AL HL LPA  L    +  I+R+TRS M+   R+++++T +  GV
Sbjct: 187 LIDGTLAGRFDVVLDALKHLALPAFALSMAGIGQITRITRSSMIENQRKDHVLTLQSFGV 246

Query: 243 SETKIVWKHALGNIKVPLITVVALSYAGLLEGSVLTETVFSWRGLGLYITDSIFGQDMPA 302
            E  I++++ L    +  +T++ L +A L+  + + E VF+W G   Y  ++I  +D+ A
Sbjct: 247 PERVIIFRYLLKLSSIAPLTIMGLEFASLIGNAFVIEMVFAWGGFASYGLNAILQKDLNA 306

Query: 303 VMGGTIVVGVIFIVINMLTDVAYRFLDPRSR 333
           V    +V G+ FIV N++ DV    +DPR R
Sbjct: 307 VTAVVLVAGLFFIVANLIVDVLISIIDPRLR 337