Pairwise Alignments

Query, 138 a.a., RNA polymerase, omega subunit (NCBI) from Rhodospirillum rubrum S1H

Subject, 87 a.a., DNA-directed RNA polymerase subunit omega from Pseudomonas putida KT2440

 Score = 59.3 bits (142), Expect = 1e-14
 Identities = 32/59 (54%), Positives = 43/59 (72%), Gaps = 1/59 (1%)

Query: 1  MARVTVEDCVLKIPNRFELVLVAGQRARDI-SAGSALTVDRDNDKNPVVSLREIADGTV 58
          MARVTVEDC+  + NRFELV+++ +RAR + + G    V  +NDK  VV+LREIA+G V
Sbjct: 1  MARVTVEDCLEHVDNRFELVMLSTKRARQLATGGKEPRVAWENDKPTVVALREIAEGIV 59