Pairwise Alignments

Query, 364 a.a., Twin-arginine translocation pathway signal (NCBI) from Rhodospirillum rubrum S1H

Subject, 345 a.a., TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein from Variovorax sp. SCN45

 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 57/271 (21%), Positives = 104/271 (38%), Gaps = 10/271 (3%)

Query: 3   RREFLSASAAAATGGLSLDGLSRPALANGAKTLTMVTTWPKDYVGLGESASRLAARVRTM 62
           RR  L  +AAA   G+   G    A       +++V   P  +   G++    A  V+  
Sbjct: 4   RRTLLGLAAAATALGMFSTGAMAQAAYKPEYKMSLVLGPPTPW---GQAGKIWADMVKER 60

Query: 63  SGGRLSITVYAAGELVPAFEA--FEAVANGTADLYHGAETYWESRSSAFNFFCAVPFGLT 120
           + GR++I +Y    L+   +   F A+  G  D+  G+   W  +    N F ++PF + 
Sbjct: 61  TQGRINIKLYPGVSLIQGDQTREFSALRQGVIDMAVGSTINWSPQVKQLNLF-SMPFLMP 119

Query: 121 AIETSAWIHHGGAQALWDALSAPYGIKPMLASATGVQMGGWFNKEIKRVEDFKGLRMRIP 180
                  +  G             G+ P+     G +      K IK   D KG+++R+ 
Sbjct: 120 DYAAIDALTQGEVGKEMFKTLEKAGVVPLAWGENGFREITNSKKPIKSPADIKGMKIRVV 179

Query: 181 G--LGARILKEVGAVPVALPGSQIHDALRDGAIDAAEWIGPWSDLALDLQKVARYYYYPG 238
           G  + + +   +GA P  +  +    AL  GA+D  E   P     +   +     +   
Sbjct: 180 GSPIYSDMFTALGANPTQMSWADAQPALASGAVDGQE--NPLFLFTVLKMQTVGQKFVTT 237

Query: 239 FHEPGTSLAVGINLGVWRGLSDQERAIIEAA 269
           +      L   +N  +W   +  ++AI+  A
Sbjct: 238 WGYVADPLVFVVNKEIWASWTPADQAIVRQA 268