Pairwise Alignments

Query, 360 a.a., OmpA/MotB (NCBI) from Rhodospirillum rubrum S1H

Subject, 341 a.a., Motility protein B from Azospirillum sp. SherDot2

 Score =  228 bits (580), Expect = 2e-64
 Identities = 142/328 (43%), Positives = 183/328 (55%), Gaps = 16/328 (4%)

Query: 5   PIIIKRIKKGGH--AHHGGAWKLAYADFVTAMMAFFLLLWLLNSVTEEQLVGISNYFAPT 62
           PII+KR     H    H G WKLAYADFVTAMM FFL++WL+N  T EQ  GI++YF P 
Sbjct: 9   PIIVKRHLGSHHDEEEHNGTWKLAYADFVTAMMTFFLVMWLMNITTTEQRKGIADYFNPV 68

Query: 63  AVSQSPSGAGGVLGGQVLGEGASQSNSSSPAVQ---LTLPPPTIGAGGQDFSDANEGVDA 119
           AVSQS SGA G+L G+ + +  S +  ++   Q   +  PP     G  D   A      
Sbjct: 69  AVSQSNSGADGMLAGRSVDKSGSLTTPNAAGDQASPVASPPVVASVGDSDRQPAGRRDPM 128

Query: 120 SDSDD------DAGKGEGKGASAGDLEGLGKLGVEPTDKQLAAAEEKRQQEEFNKTATE- 172
                      D  +   + A A          V+ T  +L A  +++  E   K A E 
Sbjct: 129 PHPPGGTVPPVDLLRPATESAPAASATEAPAPTVQATRAELEALLDRQSSELTEKAALES 188

Query: 173 ----LRQAIQAVPSLQALSNSLLIDNTPEGLRIQLIDREGLSMFPTGSSALLPHTRDLLA 228
               LRQ I A P L AL  SL+I   PEGLR+QL D+   SMF  GS+ +    R L+ 
Sbjct: 189 LERDLRQRIAASPDLSALQASLVIQQVPEGLRVQLTDQARFSMFKVGSAQMNDQGRRLMR 248

Query: 229 LVAKAVADVPNKISISGHTDAPPYSDPSGYGNWELSADRALASRRVLLANGLKEDRVDRV 288
           +VA A+A VPN I I+GHTDA  Y+  + YGNWELS+DRA A+RR LLA+G+   R+ RV
Sbjct: 249 MVAAALASVPNPIGITGHTDALGYAPDAKYGNWELSSDRANAARRELLASGIPGGRIVRV 308

Query: 289 VGKAETEPLLADDPKAPSNRRIAITLLR 316
            G+A+ +   A DP  PSNRRI+ITLLR
Sbjct: 309 EGRADLDHFGASDPLDPSNRRISITLLR 336