Pairwise Alignments

Query, 353 a.a., TRAP-type C4-dicarboxylate transport system periplasmic component-like (NCBI) from Rhodospirillum rubrum S1H

Subject, 339 a.a., TRAP-type C4-dicarboxylate transport system from Magnetospirillum magneticum AMB-1

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 69/235 (29%), Positives = 108/235 (45%), Gaps = 11/235 (4%)

Query: 39  GDGMDDVRQRVIEVMAKTLAQSRSGLAIKIYPRGKLFELEDLWTGLTGGTLEIANLPLAR 98
           GD  DD  + +   M         G+ I++Y    L    D W  LT G +++A +P   
Sbjct: 46  GDMRDDAMRSIARAM------EAQGITIRLYASASLLRPGDQWGALTSGNIDMAFMPSDY 99

Query: 99  LRALDPVFAAPTLPGLAQSVDEAYGLAATPMMAAVRGALAQRGMRVLADIWLPGALVFSG 158
           L    P  A  +LP + +S   A  +AA+P M  ++  +   G+ +LAD W+PGA   S 
Sbjct: 100 LLDRMPQLAVLSLPTMVRSRPHAERIAASPAMRDLKHQMEAAGVVILADSWIPGAYA-SR 158

Query: 159 RSCLADPPALAGRTVAAGGRLLGDLAVGQGARASAL--DEGRGRALLRALPDLVAVLPEV 216
           + C+  P    G      GR +G+   G GA    +   +  G  +   L D +A     
Sbjct: 159 QRCVQTPADAKGLRARTIGRFMGEFWAGAGAVPVPVVTSDSLGTLVSNDLID-IANTSAA 217

Query: 217 DVLTTLSPAPPACVLLAEGAGA-WFDYQPVIVSEAALARLTPAQRAALDEAAAAA 270
            +L+       AC+++   AGA W+ Y+P++VS+     L  A+R AL  AAA A
Sbjct: 218 TLLSLHMERKFACLMVPGDAGALWYLYEPIMVSKRRYDTLDEARRQALHAAAAEA 272